KEGG   Rhizobium tropici: RTCIAT899_CH01830
Entry
RTCIAT899_CH01830 CDS       T02432                                 
Name
(GenBank) G/U mismatch-specific DNA glycosylase
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
rtr  Rhizobium tropici
Pathway
rtr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RTCIAT899_CH01830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtr03400]
    RTCIAT899_CH01830
Enzymes [BR:rtr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     RTCIAT899_CH01830
DNA repair and recombination proteins [BR:rtr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RTCIAT899_CH01830
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AGB69784
Position
complement(379156..379737)
AA seq 193 aa
MQDDAPTKTLNEPTDVPEQASGLAEILAPDLSVIFCGLNPALTAHRDGHNFSNRSNRFWR
VLHLAGFIPRLLRAEEEREMLQYGLGLTSAVSRPTKSASELKRSDYIAAAPVLEEKIRKL
APANLAFLGKAAYAAISLRADVEWGRQAEKFGGASIWVLPNPSGLNRAFDLAKLTEHYRE
VKLAIEQESGFTQ
NT seq 582 nt   +upstreamnt  +downstreamnt
atgcaggatgatgccccaacgaagaccctgaatgagccgacagacgtaccggagcaagca
agcgggcttgccgaaatcctggcaccggacctctcggtaatcttctgcggattgaaccct
gcgcttaccgcacatcgcgacggacataacttctcgaaccgcagcaaccgcttctggcgg
gtcctgcaccttgccggcttcatccctcgcctgctgcgcgcggaggaagagcgcgagatg
ctgcaatatggccttggcctgacatcggcggtttcccgcccgacgaaaagcgccagcgag
ctgaaaaggagcgattacattgccgccgctccagtgctcgaagaaaagatcaggaagttg
gcgccggctaatctggcgtttctcggcaaagcggcctatgccgccatcagcctccgggcc
gatgtcgaatgggggcggcaagcggaaaaatttgggggcgcttcgatttgggtactgccg
aacccgagcggcctcaaccgggccttcgatctggcgaagctgacagagcactatcgcgag
gtaaaattggcgattgaacaggagagcggtttcactcagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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