KEGG   Rhizobium tropici: RTCIAT899_PC09440
Entry
RTCIAT899_PC09440 CDS       T02432                                 
Name
(GenBank) transcriptional regulator, Fis family
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
rtr  Rhizobium tropici
Pathway
rtr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RTCIAT899_PC09440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtr03400]
    RTCIAT899_PC09440
Enzymes [BR:rtr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     RTCIAT899_PC09440
DNA repair and recombination proteins [BR:rtr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RTCIAT899_PC09440
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AGB75674
Position
pRtrCIAT899c:complement(2032264..2032908)
AA seq 214 aa
MLERFASAGAGPSLAYEHADAETLDELHDDAQSCQRCDLYRNATHLVFGEGPRSAEIVLV
GEQPGDKEDQAARPFVGPAGRLLDQCLDEAGVDRDRCYVTNAVKHFKYQMRGKKRLHARP
NAGEIQRCAWWLGAELELLQPKLVVALGATAVSSLLGTKVKVMRDRGHILHSSAKLDVLV
TIHPSALLRIREADERERNRAAFIQDLKEIARFL
NT seq 645 nt   +upstreamnt  +downstreamnt
atgctcgagagatttgcttcggccggcgcaggcccttccttagcgtatgaacatgcagac
gcagagacactcgacgagctgcacgacgatgcgcaatcatgccaacgctgcgacctctat
cgcaacgccactcatcttgtattcggcgaggggcctcgcagcgctgaaatcgttctcgtc
ggtgagcaacccggcgataaggaggatcaggccgctcgacctttcgtggggcctgcaggc
cggctgctggatcaatgccttgatgaggcaggcgtcgatcgcgatcgctgctatgtcacc
aacgccgtcaagcatttcaaatatcagatgcgcggcaagaagcgtctgcacgctcggccg
aatgccggagagatacaacgttgcgcctggtggctaggcgcggaacttgagctgctgcag
ccaaaactggtcgtcgccctcggcgctactgccgtatcctccctgctggggacgaaggtg
aaggtcatgcgcgatcgcggacatatcctgcattcgtccgcaaagctcgatgttctcgtg
accatccatccctcggcgctgttgcggatcagggaggctgacgagagagaaagaaaccgg
gccgccttcatccaggatctgaaagagatcgcgcgctttctatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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