KEGG T02601: CK1

Ruminococcus sp. SR1/5: CK1_00150

Entry

CK1_00150         CDS       T02601

Name

(GenBank) pseudouridine synthase, RluA family

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

rum Ruminococcus sp. SR1/5

Brite

KEGG Orthology (KO) [BR:rum00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rum03009]
    CK1_00150
Enzymes [BR:rum01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     CK1_00150
Ribosome biogenesis [BR:rum03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CK1_00150

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

CBL18411

Position

complement(4165..5307)

AA seq 380 aa
MNRYLTIYIPKTAVPAPVSRFLRTQAGLTKKQISQAKFRPGGIRKNGQQCRVTETAYPGD
QIIVCLEADDVDSAQLESSSFTVYSSNHNFQFSADAISYSDSAASEFAGSDVNSHNYHSP
ATTSQFLPELAIIYEDQDILAINKPAGIVTHPSGSHYSDSLANQVASYFRSKGEPTKVRS
IGRLDKETSGILLFARNQTAAARLQNQREEGISEKTYLAAVSGFMPVDEDGAFHRISVPL
APDPDNRLKMVVSTDGTLPGSKHAETLYSVLKSTGPDAAAPASLVMLRLKTGRTHQIRVH
MASLGHPLLGDSLYCLSDISNPFSRAALHAWKLKFQLPFSIDESASDTQASMHHDKNAKK
EISLEAPLPEDFKKFYETIF

NT seq 1143 nt +upstreamnt +downstreamnt
atgaaccgctatcttactatctatatcccgaaaacagctgttccggcacctgtctcccgc
tttcttcgcacgcaggcaggtcttacaaaaaagcagatcagccaggcgaagttccgtccc
ggtggtatccgaaaaaacggacaacagtgccgggtaacggaaaccgcttatcccggggat
cagatcatagtatgcctggaagcggacgatgtggattctgcccagctggaatcttcatcc
tttaccgtctattcgtccaatcacaatttccagttctccgcagacgcaatttcatattct
gattccgcagcttcagaatttgcaggttctgatgtcaattctcacaattatcattcaccg
gctacaacgtcacagtttcttcctgagttggcgattatatacgaagaccaggatatcctc
gccataaataaacctgccgggattgtcactcacccttccggttctcactacagtgacagt
ctcgccaaccaggtggcttcctatttccgttccaaaggagagcctaccaaagtccggtct
atcggacgattggataaagaaacctccggtatcctgctctttgccaggaaccagactgct
gccgccagattacagaaccagcgtgaagaagggatttcagagaaaacctatctggctgca
gtttccggtttcatgcctgtggatgaagatggagcttttcacaggatctccgttcccctt
gcacctgacccggataaccgtctgaaaatggtcgtatccacagatggcacgcttcccgga
agcaaacatgcagaaaccctttattctgttctgaaatctaccggccctgacgcagcagct
ccggcttctcttgtaatgctccgtctgaaaaccggccgtacccatcagatccgtgtacac
atggcatctctcgggcatcctcttctgggtgattctctgtactgtttatcggacatatcg
aatccgttttcccgggctgcactccacgcatggaagcttaaatttcaacttccattttca
attgatgaatctgcttccgacacccaggcttccatgcatcatgacaaaaatgccaaaaaa
gaaatctccctggaagcacccctcccggaagatttcaaaaaattctatgaaacgatattc
tga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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