KEGG T02601: CK1

Ruminococcus sp. SR1/5: CK1_00870

Entry

CK1_00870         CDS       T02601

Name

(GenBank) 23S rRNA m(5)U-1939 methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

rum Ruminococcus sp. SR1/5

Brite

KEGG Orthology (KO) [BR:rum00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rum03009]
    CK1_00870
Enzymes [BR:rum01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     CK1_00870
Ribosome biogenesis [BR:rum03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CK1_00870

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 TRAM Methyltransf_25 Met_10 MTS Cons_hypoth95 Methyltransf_15 PrmA Methyltransf_11 PCMT UPF0020 Methyltransf_4 Ubie_methyltran Methyltransf_12 TRM TPMT

Other DBs

NCBI-ProteinID:

CBL18471

Position

66241..67602

AA seq 453 aa
MEFRKNDILTLDIEDCGVDGEGIGKADGFTVFVKDAVIGDRIKAKIIKAKKNYGYGRLME
VITPSPYRVKPVCSIARQCGGCQLQALSYEQQLKFKEKKVRGHLERIGGFQNLDMEPIMG
MEDPYHYRNKAQFPVGKNKDGKIITGFYAGRTHSIIDNRECILGVKQNKEVLDRVIGHME
KYHVQPYDEATGKGLVRHIMIRYGFHTDEMMVCLILNGDKIPAEKALVESLCEIPEMTSI
TINVNKKRNNVILGDQLRLLWGQSYIMDSIGDISYQISPLSFFQVNPIQTEKLYGKALEY
AGLTGNETVWDLYCGIGTISLFLAQKAKFVRGVEIVPQAIDNARENAKLNGIENVEFFVG
KAEEVLPRGYEKNGVYADVIVVDPPRKGCDEVLLNTILKMKPERVVYVSCDSATLARDLK
VLCAEDYELVRVSTTDMFPQGVHVETVCLLSRK

NT seq 1362 nt +upstreamnt +downstreamnt
atggaattccgtaaaaacgatatactcactttagatatagaggattgcggagttgacggt
gaaggtatcgggaaagccgatggcttcaccgtttttgtgaaagacgccgtgatcggagac
cggatcaaagccaagatcatcaaggcaaaaaagaactatggctatggccgcctgatggag
gtgatcacaccgtctccataccgtgtgaaacctgtctgctctattgcccgccagtgcgga
ggatgccagcttcaggcattatcctacgagcagcagctgaaatttaaagagaaaaaggtt
cgtggacatctggaaagaatcggaggttttcagaatcttgatatggaaccgatcatgggg
atggaagacccctatcattatcgaaacaaggcacagtttccggtaggaaaaaataaagac
ggaaagatcatcacaggcttttatgcaggaagaacccactccatcattgataaccgagaa
tgtattctgggagtgaaacagaataaagaggttttggaccgtgtgatcggacacatggaa
aaatatcatgtacagccctacgatgaggccacgggaaaaggtcttgtacgtcatattatg
attcgttacggcttccatacagatgagatgatggtctgtctgatcttaaacggagataag
atccctgcagaaaaggctcttgtggaatcactctgtgaaattccggaaatgaccagcatt
accatcaatgttaataaaaaacggaacaatgtgatcctgggtgatcagcttcgcctcctt
tggggacagtcctatataatggacagcatcggagatatttcctatcagatctctcccctg
tcctttttccaggtcaatcccatccagaccgaaaaactgtatggaaaggctctggagtac
gccggccttacgggaaatgaaactgtctgggatctgtactgcggaatcggaactatctcc
ctgttcctggcccagaaagcaaaattcgtccgcggcgtggagatcgtaccacaggccatt
gacaatgcaagagagaatgcgaagctcaatggcattgagaatgtagagttttttgtcgga
aaagcagaggaagtgctgccgagagggtatgagaagaatggcgtttatgcagacgttatc
gtggtagacccgccacggaagggctgtgatgaggtacttctgaatacgatccttaaaatg
aagccggagagggttgtgtatgtgagctgtgacagtgcgacactggcgagggatctgaag
gtgctgtgtgcggaggattatgaactggtgcgggtttctactactgatatgtttccgcag
ggagtccatgttgagactgtgtgtttgctgtcaagaaaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

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