KEGG   Ruminococcus sp. SR1/5: CK1_03900
Entry
CK1_03900         CDS       T02601                                 
Name
(GenBank) ABC-type multidrug transport system, ATPase and permease components
  KO
K14699  ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
rum  Ruminococcus sp. SR1/5
Pathway
rum02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rum00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    CK1_03900
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rum02000]
    CK1_03900
Transporters [BR:rum02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    CK1_03900
SSDB
Motif
Pfam: ABC_tran ABC_membrane SMC_N AAA_22 AAA AAA_30 ABC_ATPase RsgA_GTPase AAA_29 DEAD AAA_23 AAA_18 AAA_24 SbcC_Walker_B nSTAND3 RuvB_N AAA_15 SRP54 Zeta_toxin
Other DBs
NCBI-ProteinID: CBL18716
Position
343545..345281
AA seq 578 aa
MYGTLKKIFAFAGSKKGLLKKSLLFSFLSGLFSAMQFAALFVVIGALVSDNRDGKFICIS
LGIMAVSLIGRIIMTYFSTMEQTETGYCMVAEKRIHIGDRLRYIPMGYFNKNSIGNITAI
VTTTLGDVENSAARVLVSVLGGFFNSVALVIVLLVFDWRIGLVAAAGVLIYLAAAELALR
KSAALSGVRQHTQESLVESVLEYIQGMGIVKAFGLERDSTQSIGSAIKASCRDNLKLTKA
SVPYDAIKQAVVRVFSVLLLLASVWFWLDGSLPLAYGLILVIASFMVFNDLENAGNMASL
LQMLAASMDTANSIDDTPVMDEKGADITPKSSEIVFNKVDFSYADRKILDQVSFTITEKT
TTAIVGPSGAGKTTMCNLIARFWDVNAGKITIGGTDVRDFKLDSLMKNISMVFQSVYLFA
DTIENNIKFGCPDATHEQVVEAAKKACCHNFISALPDGYDTVIGEGGGTLSGGEKQRISI
ARAMLKDAPIIILDEATSSVDPENEDELQRAIEALTHDKTIIMIAHRLKTVRNADQILVL
DNAHIVQRGTHAELIQQKGLYADFVSARQEAIGWKLAQ
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgtatggaacattgaaaaaaatctttgcttttgcaggcagcaagaaggggcttctaaaa
aaatccctgttattctcattcctgtccgggctgttttcagccatgcagtttgccgccctc
tttgtagtgatcggcgcgttagtatctgacaaccgggacggaaagtttatctgcatttcg
ctgggaattatggccgtttccctcattgggcgtatcatcatgacctatttttccacgatg
gagcagacggaaaccggctattgcatggtggcggaaaagcgtatccacatcggagatcgg
ctgcgctacatcccgatgggctacttcaacaagaatagtatcgggaatattaccgccatt
gtcacaacaactttgggtgatgtagagaactcagcagcccgtgttctggtgtcagtgctg
ggcggttttttcaactcggttgccctcgtcatcgtcctgttggtatttgactggcggatc
ggtcttgtggccgctgccggtgtcctgatttaccttgcggcggcggaactggcgcttcgc
aaatctgccgcgctcagcggggtgcgtcagcacacacaggagtcccttgtagagtccgtg
ttggagtacattcagggcatggggattgttaaagcatttggtcttgaacgggacagcacg
cagtctattggcagtgcaattaaggcgagctgccgggataacctgaaattgacaaaggcc
agcgttccatatgacgctatcaaacaggctgttgtccgagtgttcagcgtcctgttgctt
ttggcctcggtctggttctggctggacggctccctgccgctggcctacggtctgattttg
gtgattgcttctttcatggtgttcaacgatttggagaacgccgggaatatggcctctttg
ctgcaaatgctggcggcctcgatggatacggcaaactccattgatgacacgccggtaatg
gacgagaaaggcgctgatattacgccgaagtccagcgagatcgtgtttaacaaggtggat
ttttcttacgcagaccgtaagatattagatcaggtcagctttaccattaccgaaaaaacg
actacggccattgtcggcccttccggggcaggaaagacaacgatgtgcaacctgattgcc
cgtttttgggatgtgaatgccgggaagattaccataggcggtacggatgtacgagatttc
aagctggacagcctgatgaagaatatctcgatggtgttccagagcgtgtacctatttgca
gatacgattgagaacaatatcaagtttggctgcccggatgctacccatgaacaagtggtt
gaagcggcgaaaaaggcttgctgccataactttatttctgccctgccggatggctatgac
accgtgattggcgagggaggcggtactttgtccggcggcgagaaacagcggatttccatc
gcccgcgccatgctgaaggacgcacctatcatcattttggacgaggcaacaagcagcgtt
gacccggagaatgaggatgaattgcagcgggctatcgaggcattgacccatgacaagacc
atcatcatgattgcccaccgtctgaaaaccgtccgcaacgccgatcagatccttgtactg
gacaacgctcatatcgtccagcgcggcactcatgcggagctgatccagcaaaagggcctg
tatgccgattttgtatcggccagacaggaggccatcggctggaagctggctcagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (26)   

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