KEGG   Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00087
Entry
RBI_I00087        CDS       T03158                                 
Symbol
groEL
Name
(GenBank) Chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rus  Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RBI_I00087 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rus03019]
    RBI_I00087 (groEL)
   03110 Chaperones and folding catalysts [BR:rus03110]
    RBI_I00087 (groEL)
   03029 Mitochondrial biogenesis [BR:rus03029]
    RBI_I00087 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rus04147]
    RBI_I00087 (groEL)
Enzymes [BR:rus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     RBI_I00087 (groEL)
Messenger RNA biogenesis [BR:rus03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     RBI_I00087 (groEL)
Chaperones and folding catalysts [BR:rus03110]
 Heat shock proteins
  HSP60 / Chaperonin
   RBI_I00087 (groEL)
Mitochondrial biogenesis [BR:rus03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    RBI_I00087 (groEL)
Exosome [BR:rus04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   RBI_I00087 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   RBI_I00087 (groEL)
  Exosomal proteins of breast cancer cells
   RBI_I00087 (groEL)
  Exosomal proteins of colorectal cancer cells
   RBI_I00087 (groEL)
  Exosomal proteins of bladder cancer cells
   RBI_I00087 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: CCO03827
UniProt: W0U2X3
Position
I:105263..106906
AA seq 547 aa
MAKDIIFGEDARKALQSGIDKLANTVKITLGPKGRNVVLDKKYGAPLITNDGVTIAKEIE
LDDPFENMGAQLVKEVATKTNDAAGDGTTTATLLAQALVREGMKNIAAGANPMVLKKGMD
QAVDTAVETIVANSKKIEGSEEIARVGAVSAADENIGKLIAEAMEKVTADGVITLEESKT
AETYSEVVEGMQFDRGYIAPYMVTDTDKMEAVLDDAYILITDKKISNIQEILPLLEQIVK
AGKKLLIIAEDVEGEALSTLIVNKLRGTFTCVAVKAPGFGDRRKEMLQDIAILTGGQVIS
SELGLELSETTMEQLGRARQVVVQKENTIIVDGAGNSDDIKARVGQIKSQIENTTSDFDR
EKLQERLAKLSGGVAVIKVGAATEVEMKEKKLRIEDALAATKAAVEEGIVAGGGTALINA
MPAVKKLVDKLSGDEKTGAQIVYKALEEPVRQIAVNAGLEGSVIIDKIIRSRKVGYGFNA
YTSEYVDMIPAGIVDPTKVTRSALQNAASVASMVLTTESLVADKKDPQADAAMAAAAAGA
GGMGGMY
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggctaaggatataatttttggcgaagacgcaagaaaagctttgcagagcggtatcgac
aagctcgcaaacactgttaagataacactgggacctaagggcagaaatgtagttcttgat
aagaagtacggtgctcctcttatcacaaacgacggtgttactatagctaaggagatcgag
cttgacgacccattcgagaacatgggcgcacagcttgtaaaggaagtcgctactaagact
aacgacgctgccggtgacggtacaacaacagctacattgcttgctcaggctcttgttaga
gagggtatgaagaatatcgcagcaggtgctaatccaatggtacttaagaaaggtatggat
caggctgtagatactgctgttgaaactatcgtcgctaactcaaagaagatagaaggctct
gaggagatagctagagtaggtgctgtttctgccgctgatgagaacatcggtaagcttatc
gctgaggctatggaaaaggtaactgctgacggcgttatcactcttgaggagtcaaagact
gctgaaacttacagcgaagttgttgagggtatgcagttcgacagaggatatatcgcacct
tacatggtaacagatacagataaaatggaagctgtccttgatgacgcttacattcttatc
acagacaagaagatctctaacattcaggaaattcttccacttctcgagcagatcgtaaag
gctggcaagaagctccttatcattgccgaggacgttgagggcgaggctctttcaactctt
attgtaaacaagctgagaggtactttcacttgcgtagctgtaaaggctcctggctttggc
gacagaagaaaggaaatgctccaggatatcgctatcctcacaggcggtcaggtaatttca
tctgaacttggtcttgaactcagcgaaacaactatggagcagctgggcagagcaagacag
gtagtcgttcagaaagagaacactatcattgttgacggcgcaggcaacagcgacgatatc
aaggcaagagttggtcagatcaagtcacagatcgagaacacaacttctgatttcgacaga
gaaaagcttcaggaaagacttgctaagctttcaggcggcgtagctgttatcaaggtcggt
gctgcaactgaggtagaaatgaaagagaagaagctgaggatcgaggacgctctggcagct
acaaaggcagctgttgaagagggtatcgtagcaggcggcggaacagctcttatcaacgct
atgccagcagttaagaagctcgttgacaagctcagcggtgacgaaaagacaggcgctcag
atcgtttacaaggctcttgaagaaccagttagacagatcgcagtgaacgcaggtcttgag
ggcagcgttatcatagacaagataatccgttcaagaaaggtcggctacggcttcaacgct
tatacttctgagtatgttgacatgatacctgcaggtatcgttgaccctactaaggttaca
cgttcagctctccagaacgcagcttctgttgcttcaatggtgctcactacagagagcctt
gttgcagacaagaaggacccacaggctgacgctgctatggcagccgcagcagcaggtgca
ggcggaatgggcggtatgtactaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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