KEGG   Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00278
Entry
RBI_II00278       CDS       T03158                                 
Symbol
ssb
Name
(GenBank) Single-stranded DNA-binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
rus  Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus03030  DNA replication
rus03430  Mismatch repair
rus03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RBI_II00278 (ssb)
   03430 Mismatch repair
    RBI_II00278 (ssb)
   03440 Homologous recombination
    RBI_II00278 (ssb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rus03032]
    RBI_II00278 (ssb)
   03400 DNA repair and recombination proteins [BR:rus03400]
    RBI_II00278 (ssb)
   03029 Mitochondrial biogenesis [BR:rus03029]
    RBI_II00278 (ssb)
DNA replication proteins [BR:rus03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RBI_II00278 (ssb)
DNA repair and recombination proteins [BR:rus03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     RBI_II00278 (ssb)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    RBI_II00278 (ssb)
Mitochondrial biogenesis [BR:rus03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    RBI_II00278 (ssb)
SSDB
Motif
Pfam: SSB DUF3217
Other DBs
NCBI-ProteinID: CCO06052
UniProt: W0U7J4
Position
II:330422..330946
AA seq 174 aa
MLNRVILMGRITQDLEVRQTPSGNAVLRFNVAVDRPVRQGAERQTDFITCTAWGQRAEFI
NRYFSKGRMIALEGQIRTGSYDDKNGVKHYTTEVNVDSVSFTGEPKQQGAGNYSNNYGNG
GYQQNNYQQNNGGYSQPANNSNQNNYNNAPSNDALSIGDLDDFEEVLTDDGVPF
NT seq 525 nt   +upstreamnt  +downstreamnt
atgcttaacagagttattttaatgggtaggatcactcaggatcttgaagtaagacagact
cctagtggaaatgcagttttgagattcaatgttgcagttgacagaccagttcgtcagggt
gctgaaaggcagactgattttattacttgcactgcttggggacagagagctgaatttatc
aacagatacttttcaaagggcagaatgatcgctcttgaaggtcagataagaacaggttct
tatgatgacaagaatggtgtaaagcattatacaactgaggtcaatgttgacagtgtgtct
ttcacgggtgaaccaaaacagcagggagcaggtaactattccaataactacggaaatggt
ggttatcagcagaataattaccagcagaacaatggtggatattcacagcctgcaaacaat
tctaatcagaataactataacaatgctccatcaaatgacgctttgtccattggtgacctt
gatgattttgaagaagtattgaccgatgacggagtaccgttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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