KEGG   Rhodomicrobium vannielii: Rvan_3083
Entry
Rvan_3083         CDS       T01353                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
rva  Rhodomicrobium vannielii
Pathway
rva03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rva00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Rvan_3083
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rva03400]
    Rvan_3083
Enzymes [BR:rva01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Rvan_3083
DNA repair and recombination proteins [BR:rva03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Rvan_3083
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII PriA_CRR Helicase_C AAA_30 DZR zinc-ribbons_6
Other DBs
NCBI-ProteinID: ADP72286
UniProt: E3I0G8
Position
complement(3357636..3359873)
AA seq 745 aa
MAPSDLPLFDADLPEPPARGASTRATVPVLLPLALDEPYTYEVPAGETLAPGDFVVVPLG
PVKRIGVVWREASTRPVDPRKLKPVLARLDEVPPLPPLNLAFADWVAQYTLAPKGMVLQM
MMSARLVFEAEEPRFGFRNGSGVPSRMTDARQRVLAAVADGAVWSKKRLMDAAGVSAAVI
DGLAQAGALIRAELPRTRAFAPRPDFAFASLSDAQLTAAGALQQTIAEGGFSATLLDGVT
GSGKTEVYFEAVAEALRHGERQVLILLPEIALTNQFLERFERRFGCRPGEWHSAVSPKER
ARVWRGVALGEVRVVCGARSALFLPFTDLGLIVVDEEHDPSFKQDDRVTYQARDMAVVRA
SLGKIPIVLASATPSVESIVNVQRGRYRHAVLPGRFSGNALPDVEAVDLRAVPPERGMWI
SEPLVGAVNEALAKGEQALLFLNRRGYAPLTLCRACGHRFTCPQCTAYLVEHRLRGRLIC
HHCGFSLPFPKACPSCHGEGTLAASGPGIERVTEEAQNRWPEARLAVLSSDLVPSTAALR
EILTRITEGDVDIVVGTQLVSKGHNFPKLSFVGVVDGDLSLATADPRAGERTFQLLHQVT
GRAGRFGAPGRGLIQTHFPDHPVMRALVTGNREAFYEAEIGLREEAGYPPFGRLAALIVS
GKTRYDAEGYARALALAAPEASRIQVLGPVEAPLAIIRGLHRQRLLVKAAREADLQAYLR
AWLASVDAPRGGVTLHIDVDPHSFL
NT seq 2238 nt   +upstreamnt  +downstreamnt
atggcgccttcagacctgccccttttcgacgcggatttgcccgagccgcccgctcgcggc
gcgtccacgcgcgcgactgtgcctgtgctgctcccgctcgccctcgacgaaccttacaca
tatgaagtgcccgcaggtgaaacgctcgcgcctggcgatttcgtggtcgtgcccctcggc
ccggtgaaacgcatcggcgtcgtgtggcgcgaggcgtcgacgcgcccggtcgatccccga
aagctgaagcccgtgctcgcgcgcctcgacgaggtgcccccactgccgccgctcaatctc
gccttcgcggactgggtcgcgcagtacacgctcgcgccgaagggcatggtgctgcaaatg
atgatgagcgcgcggctcgttttcgaggcggaggagccgcgtttcggctttcgcaacgga
agcggtgtgccctcgcgcatgacggacgcgcgccagcgcgtgttggccgccgtggccgat
ggcgcggtgtggtcgaaaaagcggctcatggatgccgccggtgtcagcgctgcggtgatc
gacggtctggcgcaagcgggcgcgctcatccgcgccgagcttccgcgcacgcgtgctttc
gctccgcggcccgacttcgctttcgcgagcctcagcgacgcacagctcacagcggctggt
gcgcttcagcaaaccatcgcggagggcggcttctcggcaacgcttctcgacggcgtgacc
ggctccggcaagaccgaggtgtatttcgaggcggtggcggaagcgctgcggcacggcgaa
cgacaggtgctcattctgctgccggaaatcgcgctcacgaatcagtttctcgaacgcttc
gagcgccgcttcggctgccgccccggcgaatggcactccgccgtctcgccgaaggagcgc
gcgcgcgtctggcgcggcgtggcgctgggcgaggtgcgggtggtgtgcggcgcgcggtcg
gcgctgttcctgcccttcacggacctcggccttatcgtggtggacgaagaacacgaccca
tccttcaagcaggacgaccgcgtgacatatcaggcgcgcgacatggccgtagtgcgggcg
tcgctcggcaaaattcccatcgtgctggcttcggcgacaccgtccgtcgaaagcatcgtg
aacgtccagcgcgggcgctatcggcatgcggtgctgcccggccgcttctctggcaacgcg
ctgcccgatgtcgaggcggtggacctgcgcgcagtgccgcccgagcgggggatgtggatc
agcgagccgcttgtcggcgcggtgaacgaggcgcttgcgaagggcgagcaagcgctcctg
ttcctgaaccgccggggctatgcgccgctgacgctgtgccgcgcctgcggccatcgcttc
acctgcccgcaatgcacggcctatctcgtggagcatcgcctgcgcgggcggctcatctgc
caccattgcggtttctcgctgccgtttccgaaggcgtgcccgtcttgccacggcgagggg
acgctcgccgcgtccggccccggcatcgagcgcgtgaccgaggaggcgcagaaccgctgg
cccgaggcgcggctcgcggtgctgtcgagcgacctcgtgccctcgacagcggcgctgcgc
gaaatcctgactcgcatcacggagggcgacgtcgatatcgtcgtcggcacgcagctcgtg
tcgaaggggcacaacttcccgaaactgtcgttcgtcggcgtggtggacggcgatctgagc
ctcgccaccgccgatccgcgcgcgggcgagcgcacatttcagctcttgcatcaggtgacg
ggccgcgcgggtcgcttcggcgcaccggggcgcgggctgatccagacgcatttccccgat
catccggtgatgcgcgcgctggtcaccggcaaccgcgaggctttctacgaggcggaaatc
ggcttgcgcgaagaggcgggctatccgccattcgggcggctcgcggcgctgatcgtctcc
ggcaagacgcgctacgatgcggaagggtatgcgcgcgcgcttgcgctggccgcgccggag
gcgtcacgcattcaggtgctggggccggtagaggcgccgctcgcgatcatccgtggattg
catcggcagcggctgctcgtgaaggccgcgcgcgaggccgatcttcaggcgtatctgcgg
gcgtggctcgccagcgtggatgcgccgcgcggaggcgtcacgcttcatatcgatgtcgat
ccgcacagctttttgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (35)   

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