KEGG   Stenotrophomonas acidaminiphila: AOT14_22810
Entry
AOT14_22810       CDS       T04107                                 
Symbol
sbcB
Name
(GenBank) exonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
sacz  Stenotrophomonas acidaminiphila
Pathway
sacz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sacz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    AOT14_22810 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sacz03400]
    AOT14_22810 (sbcB)
Enzymes [BR:sacz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     AOT14_22810 (sbcB)
DNA repair and recombination proteins [BR:sacz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     AOT14_22810 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AOT14_22810 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AOT14_22810 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: ALJ28651
UniProt: A0A0S1B121
Position
2505955..2507397
AA seq 480 aa
MPDTFLFYDLETFGQDPRRTRIAQFAAVRTDAQLQVVEEPVSFFVRPADDLLPSPIATLI
TGITPQHALAEGLGEAEAFARINELMARPQTCTLGYNTLRFDDEFVRHGLFRNFFDPYER
EWRGGNSRWDLLDMLRLVHALRPEGIHWPQREDGATSFKLEHLALANGVRQGDAHEALSD
VYATIGMARTFRQAQPRMWDYALKLRDKRFAASLLDVVAMQPALHISMRYPASRLCAAPV
LPLATHPHIGNRVIVFDLDGDPQMLLDLSVEEIAQRLYTRAADLPEGQQRIPLKEVHLNK
VPALVAWNHLRAPDFERLGIDPVATESRAAQLRAHAPALAEKVRRVFARERPVEGPPDPD
GALYDGFLAEGDRIQLARVRACPPEALAQMDGSFRDPRLPELLFRYRARNHPQTLDAGER
ARWDAYRRQRLLDSPGLGEQTLPDYFAQVLALRTEHHDNPAALDLLDALDQWGQNLQQSL
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgcccgacaccttcctgttctacgacctcgagaccttcggccaggacccgcgccgcacc
cgcatcgcgcagttcgccgcggtgcgcaccgatgcgcagctgcaggtggtggaggagccg
gtgagcttcttcgtcaggccggccgacgacctgctgccctcgcccatcgccaccctgatc
accggcatcaccccgcagcacgcgctggccgagggcctgggcgaagccgaggcgttcgcg
cgcatcaacgaactgatggcgcgtccgcagacctgcacgctgggctacaacacgctgcgc
ttcgacgacgagttcgtccgccacggcctgttccgcaacttcttcgatccgtacgagcgc
gagtggcgcggcggcaattcgcgctgggacctgctggacatgctgcgtctggtgcacgcg
ctgcgccctgagggcatccactggccgcagcgcgaggatggcgccacctcgttcaagctc
gagcacctggcgctggccaacggcgtgcgccagggcgatgcgcatgaggcgctgtccgac
gtgtacgccaccatcggcatggcccgcacgttccggcaggcgcagccgcgcatgtgggac
tacgcgctgaagctgcgcgacaagcgcttcgccgccagcctgctggacgtggtggcgatg
cagccggcgctgcatatttcgatgcgctaccccgccagtcgcctgtgcgcggcgccggtg
ctgccgctggcgacccacccgcacatcggcaaccgggtgatcgtgttcgacctggacggc
gatccgcagatgctgctcgacctgtccgtggaggagatcgcgcagcggctgtacacccgc
gccgccgacctgcccgaaggccagcagcgcattccgctcaaggaagtacacctgaacaag
gtgccggcgctggtggcctggaatcatctgcgcgcgcccgacttcgagcggctgggcatc
gacccggtggcgaccgagtcacgcgccgcgcagttgcgcgcacacgccccggcgctggcc
gagaaggtgcgccgggtgttcgcccgcgagcgtccggtcgagggtccgcccgatcccgat
ggcgcgctgtacgacggcttcctggccgagggtgaccggatacagctggcgcgcgtgcgc
gcctgcccgcccgaggcgctggcgcagatggacggcagcttccgcgacccgcgcctgccg
gagctgttgttccgctatcgcgcacgcaaccacccgcagaccctggatgccggcgagcgt
gcgcgctgggacgcctatcgccgccagcgcctgctggacagccccgggctcggcgaacag
accctgcccgattacttcgcgcaggttcttgccctgcgtaccgaacaccacgacaacccc
gccgcgctggacctgctcgatgcactggaccagtggggccagaacctgcagcaatcgcta
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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