KEGG   Staphylococcus aureus subsp. aureus ED98: SAAV_1960
Entry
SAAV_1960         CDS       T01124                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sad  Staphylococcus aureus subsp. aureus ED98
Pathway
sad03030  DNA replication
sad03430  Mismatch repair
sad03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAAV_1960
   03430 Mismatch repair
    SAAV_1960
   03440 Homologous recombination
    SAAV_1960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sad03032]
    SAAV_1960
   03400 DNA repair and recombination proteins [BR:sad03400]
    SAAV_1960
Enzymes [BR:sad01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SAAV_1960
DNA replication proteins [BR:sad03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SAAV_1960
DNA repair and recombination proteins [BR:sad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SAAV_1960
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 DUF1265
Other DBs
NCBI-ProteinID: ACY11810
Position
1992340..1992894
AA seq 184 aa
MIQDAFVALDFETANGKRTSICSVGMVKVIDSQITETFHTLVNPQDYFSQQNIKVHGIQP
EDVENAPTFDYVFPYMMQFIADLPVVAHNAAFDMNVLHQSIQNIGLPTPNLTYFCSYQLA
KRTVDSYRYGLKHMMEFYQLDFHGHHDALNDAKACAMITFRLLKNYENLTYVTNIYGKNL
KDKG
NT seq 555 nt   +upstreamnt  +downstreamnt
atgatacaagatgcgtttgttgcacttgattttgaaacagcaaatggtaaacgtacaagt
atttgttctgtcggaatggttaaagtcattgatagtcaaataacagaaacatttcatact
cttgtgaatccgcaagactatttttcacaacaaaatattaaagttcatggcatacaacca
gaagatgttgaaaatgcacctacgtttgactacgtatttccatatatgatgcaatttatt
gcagatttacctgttgtcgcacataacgcggcatttgatatgaacgtcttacatcaaagc
attcaaaatattggtttaccaactccaaatttaacttacttttgtagttatcaacttgct
aaaagaaccgttgattcgtatcgatacggtttaaaacatatgatggagttttatcaatta
gattttcatggtcatcatgatgcattgaatgatgccaaagcatgcgcaatgattactttt
aggctactgaaaaattatgaaaatttaacatatgtaactaatatttatggtaaaaatcta
aaagataaaggctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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