KEGG   Streptococcus agalactiae 138spar: DN94_05635
Entry
DN94_05635        CDS       T03383                                 
Name
(GenBank) single-stranded DNA exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sagc  Streptococcus agalactiae 138spar
Pathway
sagc03410  Base excision repair
sagc03430  Mismatch repair
sagc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sagc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DN94_05635
   03430 Mismatch repair
    DN94_05635
   03440 Homologous recombination
    DN94_05635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sagc03400]
    DN94_05635
DNA repair and recombination proteins [BR:sagc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     DN94_05635
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     DN94_05635
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DN94_05635
SSDB
Motif
Pfam: RecJ_OB ssDNA-exonuc_C DHH DHHA1
Other DBs
NCBI-ProteinID: AHX75159
Position
complement(1082666..1084864)
AA seq 732 aa
MISAKYSWVLNNQKPDAGFFEASKKEKISEAVASLIYSRGIKTSAELHHFLQTNLENLHD
PYLLNDMDKAVNRIRRAIENNETILVYGDYDADGMTSASIMKEALDMMGAEVQVYLPNRF
TDGYGPNESVYKYFIEQQDVSLIITVDNGVAGHEAIAYAQNQGVDVVVTDHHSMPADLPC
AYAIIHPEHPDVNYPFPYLAGCGVAFKVACALLETIPTEMLDLVAIGTIADMVSLTDENR
IMVKAGLEVMKDSERIGLQELISLSNIDLKTLNEETIGFKIAPQLNALGRLDDPNPAIEL
LTGFDDEESQAIAQMIDQKNEERKEIVQTIFDQAMQMLDQTKPVQVLAKENWHPGVLGIV
AGRILERTGQPVIVLNIEDGIAKGSARSVEALDVFQAFDQHRELFIAFGGHSGAAGMTLE
ESKVGDLSQVLCDYISKKQLDMSQKKTLTIDSELRFDELSLDTVRDFEKLAPFGMDNKKP
VFLLKDFKVSQARVLGQNGAHLKLKLEQDGQALDLVAFNMGSQLQEFQQAQHLELAVTLS
VNQWNGATTLQLMLEDARVDGIQLFDIRSKASSLPHGVPILSQEEQSKEVILLTVPDHPQ
ELKQMTQGKQFDAIYFKNEIPKNYFISGYGTRDQFASLYKTIYQFPEFDVRYKLKELSSY
LHIPYILLIKMIQIFEELHFVTITEGIMTVNKEAEKRDISESQIYQELKETVKFQELMAL
GTPKEIYDFMMS
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgatatctgctaagtatagttgggtcctcaataaccaaaagccagacgctggctttttt
gaggcttcaaaaaaagaaaagataagtgaagcggtggcttccttaatttattcgcgaggt
attaagacatcagcggaattacatcattttttacaaactaatttggaaaatctccatgat
ccttatttgttaaatgatatggataaagctgttaatcgtattagacgagctattgaaaat
aatgaaactattttagtttatggagactatgatgctgatggaatgacatcagcatcaatc
atgaaagaagctttagatatgatgggagctgaagtccaggtttatctcccaaatcgcttt
acagatggttatggtcccaatgaaagtgtttataaatattttattgaacaacaagatgtt
tcattaatcattacggttgataatggtgtggcagggcatgaagcaattgcatatgctcaa
aatcaaggtgtggacgtggtagttactgatcatcacagtatgccagcagatttaccttgt
gcttatgctattattcacccagaacatcctgatgttaattatccatttccttatttagca
gggtgtggtgttgctttcaaagtagcttgtgctctcttagaaacaatcccgacagaaatg
ttggatttggttgctattgggacgattgcagatatggttagcctaactgatgaaaatcgt
atcatggtaaaagctggacttgaagttatgaaagatagtgaaagaataggcttacaggag
ctaatatctttatcaaatattgatttaaaaacactaaatgaagaaactattggatttaaa
attgctccacaattaaacgctttaggaagacttgatgaccctaatccagctattgaatta
ctgacagggtttgatgatgaagaatctcaagcaatagcccaaatgattgatcaaaaaaat
gaagagcgaaaagaaatcgttcaaactatctttgaccaagctatgcaaatgcttgatcaa
acaaagcctgtacaagttttagcaaaagaaaattggcatccaggggttttaggtattgtg
gcgggtcgtattttagagagaactggacaacctgttattgttttgaatattgaagatggt
attgctaaaggaagtgccagaagtgtagaagcacttgatgtttttcaagcttttgaccag
catcgagaattattcattgcttttggaggtcacagcggagcagcaggcatgactttagag
gaaagtaaggtgggtgatctttctcaagttttatgtgactatatctctaaaaaacaattg
gatatgagtcagaaaaaaactctgacaattgatagtgagctacgttttgacgaacttagt
ttagacactgttagagattttgaaaagttagcgccatttggaatggataataaaaagcca
gtctttttgttaaaagattttaaagtgagtcaagctagagtcctggggcaaaacggtgct
catctgaaattaaaactagaacaagatggacaagcacttgatttggtagcatttaatatg
gggagtcaactacaagagtttcaacaagcacaacatttggagttagctgtcactttatct
gttaatcaatggaatggtgccacaaccctacaattaatgttggaggatgcgcgtgtagat
ggtattcaattatttgatattagaagcaaagcaagtagcttacctcatggagtgccaatc
ctgtctcaagaagagcagagcaaagaagttatccttttgactgttcccgatcatccacaa
gaattaaaacaaatgactcaaggtaaacagtttgatgccatctattttaaaaatgagata
ccaaaaaattattttatatctggttatggtacacgtgatcaatttgctagtttatataaa
acaatatatcaattcccagaatttgacgttcgttataagttaaaagagctcagttcctac
cttcatattccctatattttattaattaaaatgattcaaatttttgaagaactacatttt
gttacgattacagaggggattatgacagtcaataaagaagcagaaaagcgagatatctct
gagagtcaaatttatcaagaattaaaagagacagttaagtttcaagaattaatggcttta
gggacacctaaagaaatatatgattttatgatgagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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