KEGG T04155: EP23

Staphylococcus agnetis: EP23_00550

Entry

EP23_00550        CDS       T04155

Symbol

addA

Name

(GenBank) helicase-exonuclease AddAB subunit AddA

K16898

ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]

Organism

sagq Staphylococcus agnetis

Brite

KEGG Orthology (KO) [BR:sagq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sagq03400]
    EP23_00550 (addA)
Enzymes [BR:sagq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EP23_00550 (addA)
DNA repair and recombination proteins [BR:sagq03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     EP23_00550 (addA)

SSDB

Motif

Pfam:

UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 DEAD Viral_helicase1 AAA_12 ResIII DUF3799 DUF5413 DUF1363

Other DBs

NCBI-ProteinID:

ALN75951

Position

106809..110450

AA seq 1213 aa
MTIPEKPKDVQWTDAQWESIYAKGKDVLVAAAAGSGKTAVLVERIIQRILKDGIDVDRLL
VVTFTNLSAREMKHRIEARIHQAALEDPSNQHIKNQLAKIHQAQISTLHSFCLKLIQQHY
DILNIDPNFRTASEVENVLLLESVIDEVFEAHYAQLDPHFVDLTEQVGSDRNDERLRQIV
KSLYYFSVANPEPEKWLDQLDAPYIERHLQSHYLNIINQYSLLYLKAAQDAIEQAYAQLE
VLGDLDKHIVFIDEHRRALQQLLSESQINKKKLQTYEFGRMPTKPKDIGKDEMQNDMYET
FKAHFDQFKSFMSKVKDELVARDDDALVDELAHLAPRVRYLSQLTKDVISTFNKAKRERN
LLDFTDYEHFALKILYDASGQPSDIADVYRQKFEEILVDEYQDTNRVQEQIISSFKRGDT
SNGNLFMVGDVKQSIYKFRQADPSLFIEKYQAFNQPDGSSGWRIDLSQNFRSRKEVLNTT
NYLFHHMMDTEIGEIEYDAAARLYYGAPFDDADVPLHFNVLLEDESSDLTGSEQEVHLIA
EQVTSIINTKKVYDVKTKQYRPATYKDIVILERSYSNARNLQHVFKDRDIPLYVNSKQGY
FEQTEIRLMLSFLRVIDNPLQDIYLVGLMRSVIYQFTEDELAEIRVVSPHDDYFYQSIQH
YMKSEDAQPNILDKLSRFMNDLSMYRTYSQSHPVYQLIDKIYNDHYLIQYFSGLIGGKGR
RANLHGLFNKAVDFEQSSFRGLFQFIRFIDQMIERGKDFGEENVIGPNDNVVRMMTIHSS
KGLEFPFVIYSGLTRDFNMTDLNQPVILNQYEGLGLQYYDETHGLFYPSLISMSIELVNR
KEIISEEMRLIYVALTRAKEQLFLIGREKKETKLNALTQASIAHDKLTSLYRFNARNPFE
LIYSIFSKYHNTSLINDLRFKDEQENDTSLTPSISVHHIQASDVLPQTQHEVSGVNLETL
EVETNQAAQNASIIQEIENRLLFQYPYEHTQHLASKQSVSELKRQLDTEQADTNYDRVRQ
YRLGVATYQRPAFLESQKRTASEIGTLMHTVMQHLPFDEHRLSDEALQQYIESLVTRAII
PEDAVKDIRIEEVKRFVQSDLYLTIAQSDTLYRELPFIVNQYDMEKGTHETDAAIIQGMI
DVVFVKDGKHYFVDYKTDAFVRRRGMTEEQVGEQLKNKYQVQMKYYQKALETITGQKVSG
YLYFFKYGALVID

NT seq 3642 nt +upstreamnt +downstreamnt
atgacgatacctgaaaagcccaaagatgttcaatggacagatgcccaatgggaaagtatc
tatgccaaaggtaaagatgtacttgtagctgcagcagcagggtcaggtaaaacagctgtt
ttagtagaacggattattcaacgcatccttaaagatggtatcgatgtagaccgtttactt
gtcgtaacatttacaaatttaagtgcgcgtgaaatgaagcatcgtatcgaagcacgtata
catcaagccgcacttgaagacccttccaatcaacatattaaaaatcaattggcgaaaata
catcaagctcaaatttctacattgcatagtttttgtttgaaattgattcaacaacattat
gatattttgaatatagaccccaatttccgaacggcaagtgaagttgaaaatgtactcctt
ttagagtcggtgatagatgaagtctttgaagcacattatgcgcaacttgacccacacttc
gttgatttaacagaacaagtcggctcggatcgcaatgatgaacgcttgagacaaatcgtt
aaaagtttgtattactttagcgtcgccaatcctgaacctgaaaaatggttggatcaactc
gatgccccttatatcgaacggcatttgcaaagtcattatctgaacattattaatcaatat
agtttgctttacttaaaggcagctcaagatgccattgaacaagcctatgcacagttagaa
gtattaggagacctagataaacacattgtttttatagatgagcatcggcgtgcgttacaa
caacttttgtctgaatcacaaatcaataaaaagaaacttcaaacgtatgaatttgggcgc
atgcctacgaaacctaaagacattggtaaagatgagatgcaaaatgacatgtatgagaca
tttaaagcgcattttgatcaatttaaatcatttatgtcgaaagttaaagatgaacttgta
gcacgcgatgatgatgcacttgtagatgaacttgcgcatttagcaccgcgcgtacgttat
ttaagtcaattaactaaagatgtgatttcgacttttaacaaagccaaacgcgaacgcaat
ctgttagattttacagattatgaacactttgcattaaaaattttatacgatgcatcgggg
caaccttctgatatagcagatgtttaccgacaaaaatttgaggagattttagtcgatgaa
tatcaagatacaaatagagtgcaagagcaaattatctcaagttttaaacgtggtgatacc
tcaaatggtaacttgttcatggtgggtgatgtgaagcaatctatctataaatttagacaa
gcagatccaagtttatttattgagaaatatcaagcgtttaatcaacctgatgggtctagt
ggttggcgcattgatttgtctcaaaatttcagatctcgtaaagaagttttaaatacaacc
aattacttatttcatcatatgatggatactgaaataggcgaaatagagtatgatgctgcg
gcaagattatattacggcgcaccgtttgatgatgctgatgtccctttacattttaatgtc
cttcttgaagatgaatccagtgacttgactggttctgaacaagaggtacatttaattgca
gaacaggtaacttctatcattaatacaaaaaaagtatacgatgtgaaaacgaagcagtat
cgaccagcgacgtataaagatatcgttatattagagagaagttatagtaatgcccgcaat
ttacaacacgtatttaaagatagggatatcccattatatgtgaatagtaaacaaggctat
tttgaacaaacggaaataaggctaatgttgtcgtttctaagagtgattgataatccactt
caagatatttatctcgttggtttgatgcgttctgttatttatcaatttacggaagacgaa
ttagctgaaattcgagtcgtgtcaccgcatgacgattatttttatcaatccatccaacat
tatatgaaatcagaagatgcgcaacctaacatacttgataagttatcgcgatttatgaat
gatttgtctatgtaccgcacatacagtcaaagtcacccggtttaccaattaatcgataaa
atttacaatgaccattatttaattcagtattttagtggcttaattggcggtaaagggcga
cgtgcgaatcttcatggactgtttaataaagcagttgattttgaacaatctagttttaga
ggtctatttcaatttattcgttttatcgatcaaatgattgagcgcgggaaagattttggt
gaagaaaatgtgataggtcctaatgacaacgtggtgcgtatgatgaccattcatagcagt
aaaggattggagtttccgtttgtaatttactctggactcacacgtgactttaatatgaca
gatttaaatcagcctgttattttaaatcaatatgaaggtttagggctacaatattatgat
gagacacacggtttgttttatccatcgttgatatcaatgagtatagaattagtgaatcgt
aaagaaattatttccgaggaaatgagacttatttacgtcgcattaacacgagcgaaggaa
caactctttttaatcggtcgagagaaaaaagaaactaagttaaacgctttaacccaagcc
tctatagcacatgacaagttgacgtcattataccgttttaatgcacggaatcctttcgaa
ttgatttacagtatttttagcaagtatcacaatacctctttaattaatgatttaagattt
aaagatgaacaagagaatgacacctcgcttacgccgtcaatatcagtgcatcatattcaa
gcatcagatgtcttaccgcaaacacaacatgaagtgtcaggtgtgaatctagagacgctt
gaagtggagacgaatcaagcggcacaaaacgcgtcgatcatccaagagattgaaaaccga
ctattattccaatatccttatgaacacacgcagcatttagcatctaaacaatctgtttca
gaattaaagcgtcaacttgatactgaacaagcagataccaattatgatcgtgtccgtcaa
tatcgattaggggttgcaacatatcaacgtccagcgtttctagagtctcaaaaacgtaca
gcatcagaaattggaacattaatgcatactgtgatgcaacatttgccttttgatgagcat
agactttctgatgaggcgttacagcaatacattgaatcactcgtgacgcgtgcgattata
cctgaagatgcagtgaaagatatacgcatagaagaagtgaaacgatttgttcaaagtgat
ttatatcttactattgcacaaagcgacacgctatatcgtgaattaccttttatcgtaaat
cagtacgatatggaaaaaggcacgcacgaaactgacgcagcaatcatacaagggatgata
gatgttgtctttgttaaagatgggaaacattattttgtagattataaaacagatgctttc
gtgagacgtcgaggcatgacagaagaacaggtaggcgaacagcttaaaaacaagtatcaa
gttcagatgaaatattaccaaaaagctttagagacaattacaggtcaaaaggtgtcggga
tatttatatttctttaagtatggcgcattagtaatagattaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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