KEGG   Streptomyces albidoflavus: XNR_5549
Entry
XNR_5549          CDS       T02545                                 
Name
(GenBank) G/U mismatch-specific DNA glycosylase
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
salb  Streptomyces albidoflavus
Pathway
salb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:salb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    XNR_5549
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:salb03400]
    XNR_5549
Enzymes [BR:salb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     XNR_5549
DNA repair and recombination proteins [BR:salb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     XNR_5549
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AGI91855
Position
complement(6268305..6268907)
AA seq 200 aa
MTPAPAGPAGARAPRGPAGARPTPEELARVRVPDVVGPELRVLFCGINPGLLTAETGRHF
ARPGNRFWPVLHRSGFTPRRFAPAEQHLLPALGLGITNVVARPSARADELTAEEYREGGT
LLTAKVARLAPRWLAVVGITAYRAAFGERRAVVGPQERTVGGARVWVLPNPSGLNAHWSV
EAMAGEYGRLREAVDAAPAR
NT seq 603 nt   +upstreamnt  +downstreamnt
gtgacccccgcgcccgccggtccggccggtgcccgagcaccccgaggaccggcgggcgcc
cgcccgacccccgaggaactggcccgcgtccgcgtcccggacgtggtcggaccggagctg
cgggtgctgttctgcggtatcaaccccggcctgctcaccgccgagacgggccgccacttc
gcccgccccggcaaccgcttctggccggtcctgcaccgctcgggcttcaccccgcgccgc
ttcgccccggccgagcagcacctcctgccggcactgggcctcggcatcaccaacgtggtg
gcacgccccagcgcgcgggccgacgaactgaccgccgaggagtaccgcgagggcggcacc
ctgctgaccgccaaggtggcccggctggcgccgcgttggctcgcggtggtcgggatcacg
gcgtaccgggcggcgttcggcgagcgccgggccgtggtgggcccgcaggagcggacggtc
ggaggcgcccgcgtctgggtgctgccgaaccccagcgggctcaacgcccactggtcggtg
gaggcgatggccggggagtacgggcggctgcgggaagccgtggacgcggctccggcccgc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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