KEGG   Salinarchaeum sp. Harcht-Bsk1: L593_12220
Entry
L593_12220        CDS       T02693                                 
Name
(GenBank) nuclease subunit B-like protein
  KO
K16899  ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
Organism
sali  Salinarchaeum sp. Harcht-Bsk1
Brite
KEGG Orthology (KO) [BR:sali00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sali03400]
    L593_12220
Enzymes [BR:sali01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     L593_12220
DNA repair and recombination proteins [BR:sali03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     L593_12220
SSDB
Motif
Pfam: PDDEXK_1
Other DBs
NCBI-ProteinID: AGN02387
UniProt: R4W6K8
Position
complement(2653874..2657044)
AA seq 1056 aa
MVGGCICYSPSYTALRDHAFNWLDTNTAESPESAVFLESNAHQRDAIATAWREEHDALRL
TVTGIADFALTIHERLYGPYPGIETLERRRTIEQALHRLDENDVLRDAGQHTPSISELLR
ELEADGVRDIATLEDRLDSSTCTQHQQTVLTEVFEGYLELRGRIAHPESKTQNEKLAAVA
ETDQSLRTVLPHLDAIVISNLEDPSATELAVIERLAEDFPVRVLMPTVTPEAPTAGISTA
VADTIAALRGMGFEEERVEAADPLPLRDVTTRLYQPVETPDAPPAELSWHEAPTPDREIR
HVARRIREELATTDRQPDDLLVLAPGLLSYRDGIADVFDAYGIDHAYKVSILLERTYAGR
AVLDAIECCEYPRSDRIAELATNPLVDIPGTDAVELADVQRRLYTTAIDAYVDELDASAS
GIDAFLDRVAAVREAEADAVVPAVRELLGHIGLESTVETLDENADFNAGYEARAVRRVDA
ILESVQTVCEEFDPDDPLGEVGTALEGVRVPSPTQVTAGNVEIIGLQDAPGADFEELYVL
GATAQHLSGSETRPRFFQTLGEQLGVFERHAQRDVDRYRFGTLIGNAQRVHITTPETTID
DDPLLVSPFVDELARVTGLEPTGTLHDEPRASREDLQRDMAGAPPAALEPALAAARENGH
VTDAFVATATRGAECGAHRGVQELTAHDGQLTTGSIESLDGKLTRAPYSYSRLTKYAKCG
FKYLLSTGWGLDEEDDIEPGIDPLTLGSVVHETVETFYRDLQTEPGDPVDLTDHDQHDLE
QGLLAAARDAVDDEDVSLHDVFGEKTLHALFSGLASPTENEYYSPPGNDSTDDPSGTFAQ
FLDTELDFAEDGHRPSYFEAELGDDDGVQLPDGRTVPVGGIVDRVDTTPDGLTVFDYKAS
SVNGARRRENQARDGIDFQLPIYSLAAPELVDTDLTPSDVAARYYVINDNPQVKPRRSLA
DRFDDIDYDAFITDVIPDRLDAVTGAIENGAFHPAVVGERTAQCSYCEFSDICDVRHHRR
YDVVDHVTDTGHHAYVPAGAGAGDVLDELPGGDTDA
NT seq 3171 nt   +upstreamnt  +downstreamnt
atggttgggggatgcatctgctatagtccgtcctacactgcccttcgagatcacgccttc
aactggctcgatacgaacactgcagaatcaccagagagcgcagtatttctcgaatccaac
gcccaccagcgcgacgcgatcgctaccgcgtggcgcgaggagcacgatgcacttcgcctg
accgtcaccggaatcgccgatttcgcgctcacgattcacgagcgactgtacggcccgtat
cccggaatcgaaacgctcgaacgacgccgcacgatcgagcaagcgctccaccgactcgac
gagaacgacgtgcttcgcgacgccggccagcacacgccgtcgatttctgagctgttgcgg
gagctcgaagccgacggcgtccgagacatcgcaaccctcgaagatcgactcgattcgagt
acctgtacccagcaccagcaaacggttctcaccgaggtgttcgaagggtatctggagctt
cgcggacgcatcgcgcacccagagtcgaagacacaaaacgagaaactcgccgccgtcgca
gagaccgaccagtctttgaggactgtgctgccgcatctcgatgcgatcgtcatctctaat
ctcgaggacccgtcagcgaccgagctcgctgtcatcgagcggcttgcggaggacttcccc
gtccgcgtcctcatgccgaccgtcacgccggaagcaccgacggccggtatcagcacggcc
gtagctgacacgatcgctgcgctacgcggcatggggttcgaggaggaacgcgtcgaagca
gccgatccgctcccgcttcgagacgtcacgacacgcctgtaccagccagtcgagacgcct
gacgccccgcccgcggagctgtcctggcacgaagcgccgacaccggatcgagaaatccgt
cacgtcgcccggcgcatccgcgaggaactcgcaaccaccgatcggcagccagacgacttg
ctcgtactcgctcccgggttgctctcctaccgggatgggatcgcggacgtgttcgacgcg
tacggcatcgatcacgcgtacaaggtcagcatcctgctcgaacgaacgtacgccggccgc
gccgtcctggacgccatcgagtgctgtgagtacccgcgcagcgaccgcatcgcagaactg
gcaaccaacccgctcgtcgacatcccagggacggacgcggtcgaactcgcggacgtccag
cgccgcctgtacacgaccgcgatcgacgcgtatgtcgacgaactcgacgcgtccgcttcc
ggcatcgatgccttcctcgaccgcgtcgccgctgttcgggaggcggaggccgatgctgtt
gtcccggcagtccgcgagttgctcgggcatatcgggctcgaaagtacggtggagacgctc
gatgagaatgctgatttcaacgccgggtacgaggccagagccgtgcgtcgcgtcgacgca
atcctggagtccgtccagaccgtttgcgaggaattcgatcccgatgacccgctcggcgaa
gtcgggacagcactcgaaggtgtccgcgttccgtcgccaacccaggtgactgccgggaac
gtcgaaatcatcggactccaggacgcgccgggcgcggatttcgaggaactgtatgtgctc
ggtgcgacggcacagcacctctccggtagcgaaacgcgcccacggttcttccaaactctg
ggcgagcaactcggcgtgttcgaacgccatgcgcaacgagacgtggaccggtaccggttc
gggacgctcatcgggaacgcacagcgcgtccacatcacgacaccagaaacgacgatcgac
gacgatccgttactcgtctcaccgttcgtcgacgaactcgcccgcgtcaccggcttggaa
ccgactggaacccttcacgacgagccacgcgcatcgagagaagacctgcaacgcgacatg
gccggcgcacctccggcagcgctagaaccagccctcgcagcagctcgagagaacgggcac
gtcaccgacgcgttcgttgcaactgcgacgcgcggcgcggaatgcggcgcgcaccgcggc
gtccaggaactcaccgcccacgacgggcaactcacaacgggatcgatagaatcgctggac
gggaagctgacgcgcgcgccgtacagttacagtcgcctcacgaagtacgccaagtgcggg
ttcaaatacctcctcagcaccgggtggggtctcgacgaggaggacgacatcgaaccaggc
atcgacccgttgacgctcggctcggtcgtccacgaaaccgtcgaaacattctaccgcgac
ctccaaaccgaacccggcgaccccgtcgacctgaccgaccacgaccagcatgatctcgag
caaggcctcctcgccgcggcacgagacgccgtcgacgatgaagacgtctcgctgcacgac
gtgttcggcgagaaaaccctgcacgcactgttcagcggcctggcctccccgaccgaaaac
gagtactactccccgccgggcaacgacagcaccgacgacccttccggcacgttcgcgcag
ttcctcgacacggaactcgacttcgccgaagacgggcaccgacccagctacttcgaagca
gaactcggcgacgacgacggcgtgcaactcccggacggccgcaccgttccagtcggcggg
atcgtcgaccgcgtcgacaccacgcccgacggactcaccgtcttcgactacaaagcatcc
agcgtcaacggggcacgacgacgagaaaaccaggcgcgcgacgggatcgacttccaactc
ccaatctactcactcgccgccccggaactcgtcgacaccgacctcaccccgtccgacgtc
gccgcacggtactacgtcatcaacgacaacccgcaggtcaaaccgcggcgcagcctcgcc
gaccggttcgacgacatcgactacgacgcgttcatcaccgacgtgatcccggaccgactc
gacgcggtcacaggagcgatcgagaatggcgcgttccacccggctgtcgtcggtgaacgc
actgcacagtgctcctactgcgagttcagcgacatttgcgacgttcgacaccaccgccga
tacgacgtggtcgatcacgtcaccgacaccgggcaccacgcgtacgttcccgcgggcgcc
ggcgcaggggacgtgctggacgaacttcctgggggtgacaccgatgcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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