KEGG   Streptomyces albireticuli: SMD11_5516
Entry
SMD11_5516        CDS       T05230                                 
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
salj  Streptomyces albireticuli
Pathway
salj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:salj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SMD11_5516 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:salj03400]
    SMD11_5516 (ruvB)
Enzymes [BR:salj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SMD11_5516 (ruvB)
DNA repair and recombination proteins [BR:salj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SMD11_5516 (ruvB)
    RecFOR pathway proteins
     SMD11_5516 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 TIP49 Mg_chelatase Sigma54_activat nSTAND3 DUF815 AAA_3 AAA_14 Sigma54_activ_2 RNA_helicase TsaE AAA_19 Zeta_toxin ResIII AAA_28 AAA_18
Other DBs
NCBI-ProteinID: ARZ71095
UniProt: A0A1Z2L9W9
Position
6255404..6256477
AA seq 357 aa
MNWDDEAPTTTPGDRLVGAAADREEQAVEAALRPKDLEEFVGQERVREQLDLVLKAARQR
NATADHVLLSGAPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAAILSSLTEGEVLF
LDEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRAGLLPPPL
RDRFGFTGHMEFYAPAELERVIHRSARLLDVGIDADGAAEIAGRSRGTPRIANRLLRRVR
DYAQVKADGLVTREVAAQALAVYEVDTRGLDRLDRAVLTALLKLFGGGPVGLSTLAVAVG
EERETVEEVAEPFLVREGLLARTPRGRIATPAAWNHLGLVPPQQAAGAPGQQGLFGG
NT seq 1074 nt   +upstreamnt  +downstreamnt
gtgaactgggacgacgaagcccccacgaccacccccggcgaccgcctcgtcggtgccgcc
gccgaccgcgaggagcaggccgtcgaggccgccctgcgccccaaggacctggaggagttc
gtcgggcaggagcgggtccgggagcagctcgacctggtgctcaaggccgcccggcagcgc
aacgccaccgccgatcacgtcctgctctccggcgcccccggcctcggcaagaccaccctc
tcgatgatcatcgcggcggagatgggcgcgcccatccgcatcacctccggccccgccatc
cagcacgccggcgacctggccgcgatcctgtcctccctcaccgagggcgaggtcctcttc
ctcgacgagatccaccgcatgtcccggcccgccgaggagatgctgtacatggcgatggag
gacttccgcgtcgacgtgatcgtcggcaagggccccggcgccaccgcgatcccgctggag
ctgccgcccttcaccctcgtcggcgccaccacccgggccggcctgctgccgcccccgctg
cgcgaccgcttcggcttcaccgggcacatggagttctacgcccccgccgagctggagcgc
gtcatccaccgctccgcccggctcctcgacgtcggcatagacgcggacggcgcggccgag
atcgcgggccgctcccgcggcaccccccgcatcgccaaccgcctgctgcgccgtgtgcgc
gactacgcccaggtcaaggccgacggcctggtcaccagggaggtcgccgcccaggccctc
gcggtctacgaggtcgacacccgcggcctcgaccggctggaccgggccgtgctcaccgcc
ctgctgaagctcttcggcggcggaccggtgggcctgtccacgctcgccgtcgcggtgggg
gaggagcgcgagacggtcgaggaggtcgccgagccgttcctggtccgggagggtctgctg
gcccgcacgcccaggggccggatcgcgaccccggcggcctggaaccacctcggtctggtg
cccccgcagcaggcggcgggcgcccccggccagcagggactcttcggcggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (31)   

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