KEGG T05230: SMD11

Streptomyces albireticuli: SMD11_5562

Entry

SMD11_5562        CDS       T05230

Symbol

rsmB

Name

(GenBank) rRNA cytosine-C5-methyltransferase

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

salj Streptomyces albireticuli

Brite

KEGG Orthology (KO) [BR:salj00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:salj03009]
    SMD11_5562 (rsmB)
Enzymes [BR:salj01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     SMD11_5562 (rsmB)
Ribosome biogenesis [BR:salj03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    SMD11_5562 (rsmB)

SSDB

Motif

Pfam:

Methyltr_RsmB-F NusB

Other DBs

NCBI-ProteinID:

ARZ71141

UniProt:

A0A1Z2LA78

Position

6307564..6308928

AA seq 454 aa
MRILAFEALRAVDERDAYANLVLPPLLRKAREQEGFEARDAALATELVYGTLRRQGTYDA
IIASCVDRPLREVDPPVLDVLSLGAHQLLGTRIPPHAAVSASVELARVVLGDGRAKFVNA
VLRKITAHDLDGWLERVAPPYEDDPEEHLAVVHSHPRWIVSALWDALGGGRAGIEDLLDA
DNERPEVTLVARPGRATTEELLAAVGEDSALPGRWSPHAVRLAEGGEPGALEAVREGRAG
VQDEGSQLVALALAAVPVEGPDTRWLDGCAGPGGKAALLGALAAGRGAALLASEKQPHRA
RLVERALAGNPGPYQVIAADGTRPPWREGTFDRVLMDVPCTGLGALRRRPEARWRRRPED
LAGFAPLQRDLLREALRAVRVGGVVGYATCSPHPAETKAVVTDVLKRDGVSAEWIDARPY
MQGVPALGDGPDVQLWPHLHGTDAMYLALLRRTA

NT seq 1365 nt +upstreamnt +downstreamnt
gtgcggatcctcgccttcgaggcgctgcgggccgtcgacgagcgcgacgcctacgcgaac
ctggtgctgcccccgctgctgcgcaaggcccgtgagcaggagggcttcgaggcgcgcgac
gccgccctcgccaccgagctcgtctacggcacgctgcgccgccaggggacgtacgacgcg
atcatcgcgtcctgcgtcgaccggccgctgcgcgaggtcgacccgccggtgctggacgtc
ctgagcctgggcgcgcaccagctgctcggcacccgcatcccgccgcacgcggcggtgtcc
gccagtgtcgagctggcgcgggtcgtgctgggtgacggccgcgcgaagttcgtcaacgcg
gtgctgcgcaagatcacggcgcacgacctggacggctggctggagcgggtcgccccgccg
tacgaggacgaccccgaggagcacctcgccgtcgtccactcccacccgcgctggatcgtc
tccgccctgtgggacgcgctcggcggcggccgggccggcatcgaggacctgctggacgcc
gacaacgaacggcccgaggtcacgctcgtcgcccgccccgggcgcgccacgaccgaggag
ctgctggccgcggtcggcgaggactccgcgctgcccggccgctggtcgccgcacgccgtg
cggctcgccgagggcggcgagcccggcgcgctggaggccgtgcgcgagggccgggccggc
gtccaggacgagggcagccagctggtcgcgctcgccctcgcggccgtgcccgtggagggg
ccggacacgcgctggctggacggctgcgcgggccccggcggcaaggcggcgctgctcggc
gcgctcgcggccgggcgcggtgccgcgctgctggcctccgagaagcagccgcaccgcgcc
cggctggtcgagcgcgcgctggccggcaaccccggcccgtaccaggtgatcgccgccgac
ggcacgcgcccgccgtggcgcgagggcaccttcgaccgggtcctgatggacgtgccctgc
accggtctgggcgccctgcgccgccgtcccgaggcgcgctggcgccgccgccccgaggac
ctggcgggcttcgcgccgctccagcgcgacctgctgcgggaggcgctgcgggccgtgcgg
gtcgggggcgtcgtcggttacgccacgtgctcgccgcacccggcggagaccaaggccgtc
gtgacggacgtcctcaagcgggacggcgtgagcgcggagtggatcgacgcgcgcccgtac
atgcagggggtcccggcgctcggggacggccccgacgtgcagctgtggccgcatctgcac
ggcacggacgcgatgtacctggccctgctgcgccgcacggcgtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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