KEGG T03063: SALWKB2

Snodgrassella alvi: SALWKB2_1410

Entry

SALWKB2_1410      CDS       T03063

Name

(GenBank) Transcription termination protein NusA

K02600

transcription termination/antitermination protein NusA

Organism

salv Snodgrassella alvi

Brite

KEGG Orthology (KO) [BR:salv00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:salv03021]
    SALWKB2_1410
   03009 Ribosome biogenesis [BR:salv03009]
    SALWKB2_1410
Transcription machinery [BR:salv03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     SALWKB2_1410
Ribosome biogenesis [BR:salv03009]
Prokaryotic type
  rRNA transcription factors
   SALWKB2_1410

SSDB

Motif

Pfam:

NusA_N KH_5 HHH_5 S1 KH_2 RNA_pol_A_CTD HHH_2 KhpA-B_KH Pep_deformylase

Other DBs

NCBI-ProteinID:

AHN28792

UniProt:

X2HCK3

Position

complement(1558733..1560220)

AA seq 495 aa
MSREILLLAEALASEKNVDTEVVFSALEFALASAAKKKTERENMDVRVAINRNTGDYSSF
RRWLIVADEDYTYPDIQKTIEEIQEEIPGTTLQIGEYYEEPIENVEFGRIGAQTAKQVIL
QRIRDAEREQILNEFLQRKDSLVLGTIKRVERHGAIVEIGRLEALLPRDQMIPRENFRNG
DRVRALFLRVDQIGNRSQVILTRTSREFLLKLFEMEVPEIEDGLLEIKEVTRDPGLRAKI
AVKSNDARIDPQGTCIGVRGSRVNAVTEELAGERIDVVLWSPETAQFVINALSPAEVTRI
LIDEDHHSVDVIVAEDQLALAIGRGGQNVRLAAELTGWQLNIMTVDEAQERHEAEDKAVR
ELFINNLGVDENVAEVLVQEGFTSLEEVAYVPVQEMLEIEGFDESTVEELRNRARDAILT
LAIASEEQLEHMDEDLKNLEGVDQEMLHDLANEGIKTRDDLAELSVDELIEITGIDEETA
KKVVMAARAHWFDEV

NT seq 1488 nt +upstreamnt +downstreamnt
atgagtcgtgaaattttactactggccgaagctttggcgagtgaaaaaaatgtagataca
gaagtagtattcagcgcgctggaatttgctctggccagtgcggcaaagaaaaaaactgag
cgtgaaaatatggatgtgcgggtggcgattaaccgcaataccggcgattacagcagtttt
cgccgctggctgattgtggctgatgaggattatacctatcccgatattcaaaaaaccatt
gaagagattcaggaagaaattccgggaactacgctgcagattggtgagtattacgaagaa
ccaatcgaaaatgtggaatttggccggattggcgcacagacagccaaacaggttattttg
cagcgcattcgcgatgcagaacgtgaacagattttaaatgaatttttacagcgtaaggat
agcctggttctgggtacgattaaacgtgtggaacgacacggtgcaatcgtggaaattggc
cgtctggaagcactgttgccgcgagatcagatgattccgcgtgaaaacttccgtaatggt
gacagagtacgggctttgtttttacgggtagaccagattggtaaccgcagtcaggttatt
ctgacacgtacttcgcgagaattcctgttaaaactgtttgaaatggaagtgccagaaatt
gaagatggtctgctggaaatcaaggaagtaactcgtgatccgggtttacgtgccaaaatt
gcggtgaaatccaatgatgcacgtattgatccgcagggtacttgtattggtgtacgcggt
tcgcgtgtcaatgcagtaacggaagagttagcaggtgagcgtattgatgtagtgctgtgg
tcgcctgaaactgcacagtttgtgattaatgcgctgagcccagcagaagtaactcgtatt
ctgatagatgaagatcatcattctgttgatgtcattgtggcagaagatcagctggccctg
gcaatcggacgtggtggacagaatgtacgtctggcagccgaactaacaggctggcagctg
aacattatgactgtggatgaggctcaggaacgccatgaagctgaagataaagccgtacgt
gagctgtttatcaacaacctgggtgttgatgaaaacgtagctgaggtactggttcaggaa
ggctttaccagcctggaagaagtggcttatgttcctgttcaggaaatgctggaaattgag
ggttttgatgaaagtactgtagaagaattgcgtaatcgtgcccgtgatgccattttaacc
ctggccattgcctctgaagagcagttagagcacatggatgaagatttgaaaaatctggaa
ggtgttgatcaggaaatgctgcatgatctggccaatgaaggaattaagacccgtgatgat
ctggctgaattgtcagtagatgaactgattgaaattacaggcattgatgaggaaaccgcc
aagaaagtggtgatggcagcacgcgcccactggtttgacgaagtatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (41)   

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