KEGG   Sinocyclocheilus anshuiensis: 107660399
Entry
107660399         CDS       T04917                                 
Name
(RefSeq) THO complex subunit 1-like isoform X1
  KO
K12878  THO complex subunit 1
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03013  Nucleocytoplasmic transport
sanh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107660399
  09122 Translation
   03013 Nucleocytoplasmic transport
    107660399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sanh03019]
    107660399
   03041 Spliceosome [BR:sanh03041]
    107660399
Messenger RNA biogenesis [BR:sanh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107660399
Spliceosome [BR:sanh03041]
 Complex C
  Other components
   EJC/TREX
    107660399
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107660399
SSDB
Motif
Pfam: efThoc1 Death
Other DBs
NCBI-GeneID: 107660399
NCBI-ProteinID: XP_016305172
UniProt: A0A671RXG2
Position
Unknown
AA seq 656 aa
MSPPSLFDFTEARDKFTAATKSAVDIRSCKPLTNAFSHLPGNETEKKATLDQALRGVLEE
QIVKQKVNVEDFLFLIYISIDGVTEGICSATTPFLLLGDVLDCLPLDQCDKIFSFVEENV
STWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARFFPLSEKSGLNLQSQ
FNLDNITVFNKNEQDSTLGLQLTEVKEEGMEVEEGEMGDEDAPAPCSIPIDYNLYRKFWT
LQDYFRNPVQCYDKFSWMTFLKYSDETLAVFKSFKLDDMQASKRKLEEMRTAAGDHVYFA
KFLTSEKLMDLQLSDSNFRRHSLLQYLILFQYLKGQVKFKSSSCVLNDDQSLWIEDTTKL
VHQLLRETPPDGDKFASMFEHILNTEENWNSWKNEGCPSFVKERPAETKPIRPSRKRQAP
EDFLGKGPDRKILMGNDELSRLWNLNPDNMEACKSDSREFMPSLEDFFEDAIEQADPSNM
VEDEYKVVRNSNYGWRALRLLSRRSPHFFQPTNQQFKSLADYLENMVIKLAKELPKDLPS
EEIKTSEEDDDEENGDNLLKESNDSPSIQSKAVTNSQMDEIAAKLGSQWKTLADHLEMSE
KEIHVIESDSEDVELQAKMLLVAWQDREGPQATMESLVTALNSAGFSNITEGLSET
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgtctccgccgtctctcttcgacttcactgaagccagagataaatttacggctgccact
aaaagtgctgtagatatcaggagctgtaaacccctgaccaacgctttcagccatctgcct
ggaaatgaaactgagaagaaagccactcttgatcaagccctgcgtggagttcttgaagag
cagattgtgaagcagaaagtgaacgttgaagatttcctttttctgatctacatcagtata
gacggtgtgactgaaggcatctgctctgctaccactccttttcttctgctgggagatgtt
ctcgactgccttcctctggaccagtgcgacaaaatcttctcctttgttgaagaaaatgtg
tctacatggaaatctaataccttttactctgctggaaaaaattacttgttaagaatgtgc
aacgacctgctcaggagactctcgaagtctcagaatacagtgttttgtggacgaatccag
ctgtttttagcacgtttctttcctttgtcagaaaaatcaggtctgaacttacagagtcaa
ttcaaccttgataacatcacggtgttcaacaaaaatgagcaggatagcacacttggactg
cagctcacagaggttaaggaggaagggatggaggtggaggagggagagatgggtgatgaa
gatgcacctgctccctgctccattcctattgactacaacttgtacagaaaattctggacc
ctgcaggactatttcagaaaccctgtacagtgctacgacaagttctcatggatgactttc
cttaagtattcagatgagacactagctgtgttcaagagcttcaaactggatgacatgcaa
gcctcaaagagaaagctggaggagatgaggactgctgctggagaccacgtctactttgcc
aagttcctcaccagtgagaaattgatggaccttcaattgagtgacagcaacttcagacga
catagtctgcttcagtatctcatcctcttccagtatctcaagggccaggtcaagttcaag
agttccagctgtgttttgaatgacgatcagtctttgtggattgaggacacgaccaaacta
gtccatcagttactgagagaaacccctccagatggtgacaagtttgcgtcgatgtttgag
cacatcctgaacacagaagaaaactggaactcttggaaaaatgaaggctgtccaagcttt
gtgaaagaaagaccagcagagaccaaacccatccgtcccagcagaaagagacaagcacca
gaggactttttggggaagggccctgatcgcaaaatcctcatgggaaatgacgaactctca
aggctctggaatctaaaccctgacaatatggaggcctgcaagtcagatagcagggagttc
atgccatcactggaggacttttttgaggacgctatcgaacaggcagatccatcaaacatg
gtggaggacgaatacaaagttgtgcgtaactcaaactacggctggcgagccttgcgattg
ctctccagaaggagtcctcacttcttccagcccaccaaccagcagttcaagagtctggca
gactatctggaaaacatggtcatcaaactggccaaagagcttcctaaagaccttccttct
gaggagataaaaacaagcgaggaggatgatgatgaggagaatggagataacctgttaaaa
gagagcaatgacagtcccagcattcagagcaaggccgtgaccaacagtcagatggacgag
atcgcagccaagcttgggtcgcagtggaagacgctggcagaccacctggagatgagcgag
aaggagatccacgtgatcgagtctgacagcgaggatgtagaactacaggccaagatgctg
ctggtggcctggcaggaccgagaaggccctcaagctacgatggagagcctggtcacggct
ctgaactcggctggtttcagtaacatcacagaaggtctcagtgaaacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system