KEGG   Sinocyclocheilus anshuiensis: 107670034
Entry
107670034         CDS       T04917                                 
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
sanh  Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sanh03021]
    107670034
   03036 Chromosome and associated proteins [BR:sanh03036]
    107670034
Transcription machinery [BR:sanh03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     107670034
Chromosome and associated proteins [BR:sanh03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     107670034
    SLIK complex
     107670034
SSDB
Motif
Pfam: SNF2-rel_dom CDH1_2_SANT_HL1 CHD1-like_C Helicase_C Chromo HDA2-3 DEAD CHDCT2
Other DBs
NCBI-GeneID: 107670034
NCBI-ProteinID: XP_016317984
Position
Unknown
AA seq 1780 aa
MDGRSEDESVSNSSGESSNSDDESGSGSGSGSGSSSSSSSSSSSQSGSSDSGSGSDSGSQ
SDSDSEKSKEKNDEDNKIDGAAFWKSNPSILTVQRSAMLRKQQLQQQQLQQQSSSNTGSD
EDSSSSDESDDDSKSRSKGSGSDSDSGSGSGSGSSDSSAEEQGNSDESVSDYEPSHKVKS
RKPSNKANARNGKNSKAPKKKPSRSSSDEEDDYKKALAGPRRQATVNVSYKEDEELKTDS
DDLVEVCGEDVPPPEEDEFETLERVMEVRIGRKGATGAVTTVYAVEADGDPNANFDPSRQ
PGEVQYLMKWKNWSHIHNTWETEETLKQQNVKGMKKLDNFKKKDQEKKKWLKAASPEDVE
YFNCQQELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLSYFECSWEDGALIARK
FQKCIDEYMSRNQCRTIPSRECKVLKQRPRFVPMKKQPLYIGADGLELRDYQLEGLNWMA
HSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQLWA
PQINFVVYLGDISSRNMIRTHEWMHPQTKRLKFNVLLTTYEILLKDKSFLGNVSWAFIGV
DEAHRLKNDDSLLYKTMIEFKSNHRLLITGTPLQNSLKELWSLLHFIMPIKFHSWEMFEE
EHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQKQYYKWILTRN
YKALSKGTKGSKSGFLNVMMELKKCCNHCYLIKSPEDEFYNRQEGLQHLIRSSGKLILLD
KLLVRLKERGHRVLIFSQMVRMLDILAEYLKYRQFLFQRLDGSIKGEMRKQALDHFNAEG
SEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVT
KGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSTPFNKEELSSILKFGAE
ELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFSMMEEEEIDM
DTERDDRNWDDIIPEEQRRRLEEEERQKELAEIYLLPRMRKCAKQNNFNGNEGRRSRNRR
YSGSDSDSVSDRKRPKKRGRPRTIPRENIKGFTDAEIRRFIKSYKKFGGPLERLDAIARD
AELVDKSEHDLRRLAETVHNGCLKTLRENPCGPERSSGGRRGKVKGPTFRISGVQVNAKL
VISHEEELAPLHKAIPADPEERKRYIIPCHSKAAHFDIEWGKEDDSSLLIGIYEYGYGSW
EMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKQAGTANSRK
RKPRGKKNKAVKPKMDDVTNSLSSAPPSDKSSEEEDEKEEEEKETSPVKPPNRRACVSER
SVKEEEDEDEESDEDEPEDKEPDEKDIMEKVVKKEIKKEKKEEGLDSKEREPKEKEMKQE
PEEETPAEKAVEVKADTPVHTPSGGDALPLSEESEELDQKTFSVCKERMRPVKAALKQLD
RPEKGLSEREQLEHTRQCLIKIGDHITECLREYTNPEQIKQWRKNLWIFVSKFTEFDARK
LHKLYKHAIKKRQENAQAVEQNTSTVNAQSFKHADVERIKESQQDDSSRDSYSSDRHHSS
RYHEHSKDRHAGDSYRKSSDARKRPYSSFSNGKDHRERERDQYRERGERQDSRYYSDSKH
RRLDEHRSSREHRSESNSKDRTHSEQRFHSEHRSASDYTHHKSSRDYRYHSDWQMEHRPR
SPRDQRSPYDSRSPLGHRSPFEYSSDHRSTPEQVWSGRKT
NT seq 5343 nt   +upstreamnt  +downstreamnt
atggatggacgcagtgaggatgaaagtgtcagcaacagcagcggagagtccagtaattca
gatgatgagtctgggtcaggatcgggttctggctctggctcgagttcaagcagcagcagt
tctagcagtagccaatcagggagcagtgactcaggaagcggctcggattctggaagccaa
tcagactcggactctgagaaatccaaggaaaagaatgatgaagacaacaaaatcgacgga
gcagcgttttggaagtccaatcccagtatcctgacagtgcaaaggtcagccatgctcagg
aaacaacagcttcaacagcagcagctccagcagcagagctcctcaaacactggctcagac
gaggactcttccagtagtgatgagtcggatgatgactcaaagagcaggagtaaagggtct
ggttcagactcggactcgggctctggttcaggaagtggctcgtctgactcttcagcagag
gagcaagggaacagtgacgagtccgtgtcagactatgagcccagccacaaagtcaagagc
agaaaaccttcaaacaaggccaatgccaggaatgggaaaaatagcaaagctcccaagaag
aagccctcccgctcctcctcagatgaagaggacgattataaaaaagctctagcgggacct
cggcggcaggccacagtcaatgtgagctacaaagaagatgaggaactgaagactgattca
gatgacctggtggaggtgtgtggagaggacgtcccaccgccagaggaggacgagtttgag
acactggagagagttatggaagtgaggataggccggaaaggagcaactggggccgtaacc
acggtgtatgcagtagaagcagatggagaccccaacgccaactttgaccccagcagacag
ccaggagaggtgcaatacttgatgaagtggaagaactggtcccacattcacaacacctgg
gagacagaggagacgctcaaacaacagaacgtgaagggcatgaagaaactggacaacttc
aagaaaaaagatcaggagaaaaaaaaatggctcaaagctgcctcgcctgaggatgtggag
tacttcaactgtcagcaggagctcatggatgacttgcattcacaatatcagcttgtggag
agaatcatcggacattcaaatcagaagtctgccgcaggttatccagattacctttgtaaa
tggcaggggctgtcatactttgagtgcagttgggaagacggtgctctcattgccagaaag
tttcaaaagtgcattgatgaatacatgagtcggaatcagtgcagaaccattccctccaga
gagtgcaaggttttaaaacagaggccacggtttgtacccatgaagaagcagcctctctac
attggcgcagatggtttggagctgcgggactatcagttggagggtctgaactggatggcc
cattcttggtgcaaaggaaacagttgcatcctggcagatgagatgggtctgggcaaaacc
atccagactatcagttttctcaattacctgttccatgagcaccagctttacgggccgttc
cttctggtggtgcctctgtctaccctcacatcctggcagagggagatccagctctgggct
cctcagataaattttgtggtgtacctgggagacatcagcagcagaaacatgatccggaca
catgaatggatgcatccgcagaccaagcgactgaagttcaacgttctgcttactacatat
gaaattctgctgaaggataagtcatttttaggaaatgtgagctgggcgttcattggtgta
gacgaggcccatcggctgaagaacgacgactcactcctctacaagactatgattgagttc
aagtccaaccacaggctcctgatcacaggcacacccctccagaactcactcaaagagctc
tggtctctgctgcattttattatgcctataaaatttcactcgtgggagatgtttgaagag
gaacatggcaaaggcagagactctggctataccagccttcataaggagctggagcccttc
ctgctgcgcagagtgaagaaggatgtggagaaatctctgcctgccaaggtggagcagatc
ctcagggtagagatgagcgctgttcagaaacaatactacaagtggatattgacgagaaac
tataaagccctgagtaaaggcactaaaggaagcaagtcgggcttcctcaacgtcatgatg
gagttgaagaaatgctgtaaccactgctacctcattaaatcgcctgaggacgagttctac
aacagacaagaaggcctacagcacctcattcgcagcagtgggaagctgattcttctggat
aagctgctggttcggctgaaggaacgagggcaccgtgtgcttatcttctcccagatggtc
cggatgctggacatcctggctgagtacctgaagtaccggcagttcttattccagagactg
gatggttccataaagggtgaaatgaggaagcaggctttagatcatttcaatgcagagggc
tctgaggatttctgcttcctgttgtccacgcgagcaggtggtctgggcattaacctggcc
tctgcagatacagtggtcatttttgactccgactggaaccctcagaatgacctgcaggcc
caggccagagcgcacaggattggtcagaaaaaacaggtgaatatataccgtctggtgaca
aagggctcagttgaggaggagattattgagagagccaagaagaaaatggtgttggaccac
ctcgtgattcagaggatggacaccactggaaagacagtccttcacacgggtgctgctcct
tccagttctactccattcaacaaggaggaactgtcatccatcctgaagtttggtgctgaa
gaacttttcaaagagccggaaggagaggaacaggaacctcaggagatggacattgatgaa
atcctgaagagagcagagaccagagagaacgaccctggaccatcgactgtaggagaagag
ctcctctctcaatttaaggtggcaaatttctccatgatggaggaggaggagattgacatg
gacactgagagggatgataggaactgggatgacattatcccagaggagcagcggaggaga
ctcgaggaagaggagcgacaaaaagagctagcagagatctatttactgccccgcatgagg
aagtgtgctaaacagaacaactttaatggaaatgagggcaggcgtagccggaacagacga
tactctggttcagacagtgactctgtctctgacagaaagaggcccaagaaacgaggaaga
cctcgaactattccaagagagaacattaagggtttcactgatgctgagatacgcaggttt
atcaaaagttataaaaagtttggtggccctttagaaaggcttgatgctatcgctcgtgat
gctgagctggtggataaatcagagcatgatctgcggcggctggctgagaccgtacacaac
ggctgtttgaaaacgctaagagagaacccctgtggacccgaacgaagctcaggaggcagg
cgagggaaggtgaaaggacccaccttcaggatctcaggggttcaggtcaatgctaagctg
gtgatctctcatgaggaggaactggcaccattacacaaggccattcccgctgaccctgag
gagaggaagaggtatataatcccatgccactcaaaggcagctcattttgacattgagtgg
ggtaaagaggacgactccagcctgcttattgggatttatgagtacggttatggcagctgg
gagatgatcaagatggacccagacctcaacctcacacataagctccttcctgatgaccct
gacaagaagccacaggccaaacagttgcagacacgagctgactacctcatcaaattactg
agcaaagacctcgccaagaaggaagcacagaaacaggccggcacagcaaattcacgcaag
agaaaaccacggggcaagaagaataaagcggtaaagccgaagatggatgatgtgacgaac
agtctgtcctctgcaccgccatcagataagagctctgaagaagaggatgagaaggaggaa
gaggaaaaggaaacttctccagttaagccacccaacagaagagcatgtgtgtcagagcgg
tcggtaaaggaggaggaggatgaggatgaagagtctgatgaggacgagccggaggataaa
gagcccgatgagaaggacatcatggagaaagtggtcaaaaaagagattaagaaggagaag
aaagaggagggtctggacagcaaagagagggaaccaaaagagaaggagatgaagcaagag
cctgaagaagagactcctgcagagaaggctgtagaggtgaaagccgatacccctgtgcac
acgccctccggaggagatgcacttcccctgtctgaggagtctgaagaactggaccagaaa
acctttagcgtgtgtaaggagcgcatgcggccagtgaaggcagcactcaagcagctggat
cgaccggagaagggtctgtctgagcgcgagcagctggagcacacgcgtcagtgcctgatc
aaaataggagatcacatcaccgagtgtctgagagaatacaccaaccccgaacagatcaaa
cagtggaggaaaaacctgtggatatttgtttcgaaattcacggaatttgatgcaaggaaa
ctgcataaactatacaaacacgccatcaagaaaagacaagaaaatgctcaggcagtggag
cagaacactagcactgtaaatgcacaaagctttaaacatgcagatgttgagcggataaag
gagtcccagcaggacgacagcagtagagacagctacagctctgacagacatcactcatct
cgctaccatgagcacagcaaagatcggcacgctggcgactcgtacaggaagagctccgat
gccaggaagagaccctactcctccttcagcaacggcaaagaccaccgagagcgagagaga
gaccagtacagagagagaggagagcgacaggacagcagatactacagcgacagcaagcac
aggaggctagacgagcaccgctccagcagagagcaccgctcagaaagcaactccaaggac
aggactcactccgaacaacgcttccactctgagcaccgctctgcctccgactacacgcat
cacaaatcgtcccgggactaccgctaccattcagactggcagatggagcaccggccgcgc
tctccccgagaccagcgctccccatacgactctcgctctccgctgggccaccgctcgccc
ttcgagtactcgtctgaccacagaagcacacccgaacaggtctggagcggccgcaagaca
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system