KEGG   Salmo salar (Atlantic salmon): 106568405
Entry
106568405         CDS       T04363                                 
Symbol
dhx29
Name
(RefSeq) DExH-box helicase 29
  KO
K18995  ATP-dependent RNA helicase DHX29 [EC:5.6.2.6]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:sasa03012]
    106568405 (dhx29)
Enzymes [BR:sasa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     106568405 (dhx29)
Translation factors [BR:sasa03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    106568405 (dhx29)
SSDB
Motif
Pfam: DEAD Helicase_C OB_NTP_bind HA2_C AAA_22 nSTAND3 AAA_19 HA2_N AAA_16 nSTAND1 ATPase
Other DBs
NCBI-GeneID: 106568405
NCBI-ProteinID: XP_013994192
UniProt: A0A1S3LTC5
Position
ssa13:95103649..95131942
AA seq 1382 aa
MGGKKKKSATVPTVQPAAAGNNVPAAGNGVADPATTGKKQKPTPAKAAVKENKPKGPKTY
SLTNTAQVDTGGVTDKSILKVVIQTDLEKKIIKLINDFRQENGDKGPISGRLTNKKLLDL
YLALQKFKFKTEHIEEAMKSSVLYGGDLHSALDWLCLNLKDEELPAGFSQRMQEENHETK
PKFQPAPQAPEPESPKEPKKEPAKVNVKDEGASVKEWILRYAEQSSEESSEEEEEQSGKK
TRNPELDEKFDPNDRYLVLTAQLYDAKEMAATAKAKKDKGGQRTAQDRIRVIQQEMKPLE
SHPMFNTAIKVVDTPKVEEKKPPAPTEGKEELAFGLFEQAEKETPPPAEKTAKKNEPKDI
RNFDYTARSWTGKSPKQFLIDWVRKNLPKSPAPSFQKVAAGRYWKCRVRVQRLDDVLEVC
PNILTEDGMQAQHLGATLAIYNLCKGQSVHMLIPPTYREVWLEWRDSEQAEEEELRTAIN
KPRDQFIARLLTRLKQQQPQKKCPSPQPGLQGAGDELEDDWESLANLEEEEDPGKTITTK
QRGGGVAEVAARALLLKLRDSALSRRLQMDREQLPVFQHRVRVMEALRRNRVVVVAGETG
SGKSTQIPQFILEELLTGGAAAQPCNIVVTQPRRISAMSLASRVSQELGCDDGPGSKSSL
CGYQIRMENKSSDSTRLLYCTTGVLLRKLQQDHMLSSLTHIIVDEVHERSVQSDFLLTIL
KDVVQKRSNLHLVMMSATVDCDKFAAYFNRCPIVNIPGRTFPVEVFHLEDIVEETGYVLE
KDSEYSQKILEEEEEVNINFTQKGGKSMQHQEFIVKDSGSGWDLGPDLDHFSSRTRHALQ
YMNPNKINMELVLDLLDYLDKSPQFAVVDGAVLVFLPGLAHIQQLYDLLSTDKRFRGKDR
YKLVALHSTLSSKDQAAAFTVPPTGVRKIVLSTNIAETGVTIPDVVFVIDTGKTKENKYH
ESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYPKFRFQAFMDYSIPEILRVPLEE
LCLHIMKCEYGSPEEFLCRALDAPQPQSVSNAVCLLRRIGACIPEGHTLTPLGHHLATLP
VNVKIGKMLIFGAILGCLDPIATIAAAISEKSPFATPMNQKDQANLAKAALAVANSDHLT
IYNAYLGWKNIRSEGYRAEMAYCRKHFLNRTALITIEDIKQELMRMMDQAGFSGSSRSGR
GPPSRDRSDPSGPQAPLTPLGKPQICVLNAVLTAGLYDSVGRILYTPSVDVLDRVACSVE
TAQGKAQVHPSSVNRCLQTRGWLLFQEKVKYSKIYLRDTTLISPFPMLLFGGDIDVQHRE
RLISLDGWIHFQAPVRIGVIFKHLRKLIDSLLEKKLENPRMNLEDEKTIQLIIELIKMEN
VF
NT seq 4149 nt   +upstreamnt  +downstreamnt
atgggtggaaagaagaagaaatcagccactgtccctacagtccaaccggcagcagcaggc
aacaatgttcctgctgctggaaacggcgtggctgaccctgctactactgggaaaaagcag
aagccaactcctgctaaagctgctgtgaaagaaaacaagccaaaaggtccaaagacctac
agcctcacaaacacagcacaagtggacacaggaggagtcactgacaagtctatactcaaa
gttgtcattcaaacagacttggagaagaagatcatcaaactgatcaatgatttcaggcaa
gagaatggagacaaaggaccgatatcaggaagactcaccaacaagaaactgctggatctc
tacttagctctgcagaagttcaagtttaagacggagcacattgaggaagccatgaaaagc
agtgtgttgtatggaggagacctgcactctgccctcgactggctttgcctgaacctgaaa
gatgaggagctgccagcaggtttcagtcagaggatgcaggaagagaaccatgagaccaag
ccaaagttccagcctgcaccccaagcacccgaacctgaatctcccaaagagccgaagaaa
gagccggcaaaggtgaatgtgaaggatgagggggccagtgtgaaggagtggatccttaga
tacgcagagcagtccagtgaggagagcagcgaagaagaggaggagcagagtgggaagaag
acacggaacccagaactggatgagaagtttgatccgaacgacaggtacctggtgctcact
gcacagctgtacgatgccaaggagatggctgctacagccaaggccaagaaggacaaagga
ggacagaggactgcacaggacagaatcagagtcatacagcaagagatgaagccactagaa
tcccatcctatgttcaacacagcgataaaagttgtagacacacccaaagttgaggagaag
aaaccacctgctccaactgaggggaaggaagaactggcatttggcctgtttgaacaagct
gaaaaggaaacgccccctcccgcagagaaaacagcgaaaaagaatgagcctaaagacatc
cgtaactttgactacacggctcgcagctggaccggcaagtcccccaaacagttcctgatt
gactgggtcaggaagaacctccctaagagccctgctccctccttccagaaggttgctgct
gggagatactggaagtgcagggttcgtgttcagagactggatgatgttttggaggtttgt
cccaatatcctcactgaggacggcatgcaggctcagcacctgggtgctacactggccatc
tacaacctatgtaaaggacagtcagtccatatgttgatccctcccacgtaccgtgaggtg
tggctggagtggcgggacagcgagcaggcagaggaggaggagctccgcacagccatcaac
aaaccccgagaccagttcatcgcccgactgctgacccggctgaaacagcagcaaccccag
aagaagtgtccttctccccagccagggctgcagggagctggggacgagctcgaggatgac
tgggagagcctggccaacctggaggaagaggaagacccagggaaaaccattaccacgaag
cagagaggcggtggtgttgcagaggtggcggctcgggcccttcttctgaagctccgtgac
tcggccctgtccaggcggttacagatggacagagagcagctcccggtgttccagcaccgc
gtgcgggttatggaggctctgcggcgcaaccgtgtggtagtggtggcgggggagacaggc
agcgggaagagtacccagatcccccagtttatcctagaggagctgctgactgggggagct
gctgcccagccctgtaacatagtggtcacccagccacgcaggatctctgccatgagtctg
gccagcagggtgtctcaggagctgggctgtgacgacgggcctggatccaagtcgtcgctg
tgcgggtaccagatccggatggagaacaagtcttcggactcgacccgtcttctgtactgc
accaccggggttctcctcaggaagctgcagcaggaccacatgctcagctctctgacccac
atcatagtggacgaggtccatgaacgcagcgtccagtctgatttcctgctgaccatcctg
aaggacgtggtccagaaacggtccaacctgcacctggtcatgatgagcgccacggtcgac
tgtgataagttcgctgcctacttcaaccgctgtcctatagtcaacatccctggcagaact
ttccctgtcgaggtgttccatctggaggacatagtggaggagacgggctatgttctggag
aaggactctgaatacagccagaagatcctggaggaggaggaggaggtcaacatcaacttc
acgcagaaaggagggaagagcatgcagcaccaggagtttatagtgaaagactcaggctct
ggctgggacctgggtcctgacctggaccacttcagcagccggacccgccacgccctgcag
tacatgaaccccaacaaaatcaacatggaactggtcctggacttgctcgactacctggat
aagtcccctcagtttgcagtggtggatggagctgttctggtgttcctcccaggtctggcc
cacatccaacagctttatgacctgctctccacagacaagagattccgtggcaaagacagg
tacaaactggtagccctgcactccacactgtcatctaaggaccaggctgctgcatttaca
gtgccccctactggagttaggaagattgtgctgtccacaaacatagcggaaactggagta
acaatacctgatgttgtgttcgttattgataccggaaagaccaaagaaaacaagtaccat
gagagtagccagatgagttccctggtggagacgtttgtcagcaaggccagcgccctccag
aggcaaggcagggcaggacgcgtgcgggacggcttctgcttccgcctgtaccccaaattc
aggtttcaggctttcatggattactccataccagagatactgagggttccactagaggag
ctgtgtcttcatatcatgaaatgtgagtatggctctccagaggagttcctgtgtcgagcc
ctagatgcgccccagccccagtctgtgagtaatgccgtgtgcctgctccggaggatcgga
gcgtgtataccggagggccacaccctcaccccgctgggtcaccatctcgccaccttgcct
gtcaacgtcaagatcggcaagatgcttatctttggtgccatcttgggctgcctggacccc
attgcgactatagcagcagcgatctcggagaagtctccctttgccacacccatgaaccag
aaggatcaggctaacctggctaaagctgccctggctgtagccaactcagatcacctgact
atctacaatgcttacctggggtggaagaacatacgcagtgagggatatcgagccgaaatg
gcctactgcaggaaacacttcctgaaccgtaccgccctcatcaccatagaggacatcaaa
caggagctgatgcgtatgatggaccaggctggattctctggttcctccaggtccggtcga
ggaccaccttcccgggatcggtctgaccccagcggtccccaagctcccctcacccccctt
ggtaagcctcagatctgtgtcctgaacgcggtgctgacggcaggactgtatgacagcgtg
gggcggatcctctacactccctctgtggacgtcctggaccgggtggcgtgctctgtggag
acagcccaggggaaggcccaagtccacccctcctccgtcaaccgctgcctgcagacacgc
ggctggctgcttttccaggagaaggtaaaatactctaagatctacctgcgggacacaacg
ctgatctctcccttccccatgctactgtttggaggggacatcgacgtacaacaccgggag
agactcatctctctggatggatggatacacttccaggccccagtgaggatcggagtgatc
tttaaacatctgaggaagctcatagactcactactggagaaaaagctggagaacccaagg
atgaatctagaagatgagaagaccatccagttgataatagaactgatcaagatggagaat
gtcttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (46)   

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