KEGG   Salmo salar (Atlantic salmon): 106573246
Entry
106573246         CDS       T04363                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04510  Focal adhesion
sasa04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106573246
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106573246
SSDB
Motif
Pfam: Laminin_EGF LAMININ_IV_B Laminin_N ATG17_like F5_F8_type_C DUF2777 EzrA
Other DBs
NCBI-GeneID: 106573246
NCBI-ProteinID: XP_014003618
UniProt: A0A1S3MK65
Position
ssa16:complement(10235344..10269058)
AA seq 1789 aa
MFIFQIATMLSAGACVLAQVGIPEFSDVCTEGSCYPATGDLLIGRAHQLSTNSTCGLHRP
EPFCIVSHLQDEKKCFLCDSTDAYVKSVVNTTTGHRVENVVTTFAPNRLKTWWQSENGLE
KVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCAAAYPAISP
GPMQKVDDIICDSHYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNMLKITNLRVKFTK
LHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHASECAPVDGAGAGDGVEGMVHGH
CMCNHNTMGLNCEKCQDFYHELPWRPAKGRNTNACKKCNCNQHSGSCHFDMAVYVSTGNV
SGGVCDECQHNTMGHNCEQCKPFYYQHPERDIRDPSICESCNCDPVGSLNGGICDRMTDV
SSGLITGQCRCKPNVEGERCDQCQQAHYGLGDHPLGCLACTCNTLGTVPGGSPCHTDSGD
CFCKSLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGALNNDCSQETGQCACREHMFGR
RCDQVESGFYFIALDHYTYEAEDAKFGPGLTVVQRPRPQDRSPTWTGIGFVNVPEGAYLE
FSIDNIPHSMEYDVLIRYEPQLPDQWEEVLMTVMRPSLISADSRCANTMPDDDNQMISLH
PGSRYVVLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGS
VGGDVATNSAWDTFQRYRCLENSQSVVKTPSTDICRNFIFSVSALLHQGAKACQCDPQGA
LSTVCDASGGQCQCRPNVVGRNCDKCAPGTYLFGPSGCRPCDCNPQGSKDAFCHEATGQC
VCIPGAYSRQCDRCLPGHWGFPNCRLCTCNGHTEQCDPYSGKCLGCREQTTGHNCERCLD
GYYGDPVLGSGDHCRLCMCPDGPRSGRQFASGCYRGLDSPYQVFCICSPGYRGARCEECA
PGYYGNPHENGGHCQPCQCNNNIDMLDQESCNARTGECLKCLYHTEGQGCHSCKLGYYGD
ALTQNCRKCVCNHLGTNPATCPAVGDCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASE
TGCDACDCDPNHSFGTSCNELSGQCSCKPGFGGKTCRECRELFWGEPEVKCNACDCDSRG
IAEQQCNKANGHCVCVEGVSGPRCDVCTRGYSGTFPYCERCHQCFADWDLVVGQLTNQTH
RLVNKVNTIKASGITGPYKHTIDNMEQSAGAIRTILAQNPATQPLSEIQQLLEQATDLME
KMSNKLNLTEEALAQVSSDDNSTNTKLDSLKEDTQKLDRTVKDLLDQVEFIKNTDIRGAT
DSVTKYYQQSLAADARANASTSGPGNPVESSAILRKATEDKMNDTREEFHRRQEEHAKRL
DDLAGQLETLDLSELSVKTCGSPADEACVDSQCGGLSCVDSKGNRRCGGEGCDGLVNLAN
NAWQKAKGFDQEILTAMEEVDKLAKMVSEAKVKADEAKLSAQNVLLKTNGTKQRVDQSNE
ELRSLIRQIRDFLTQDAADLESIEAVANEVLAMQMPTTPAQLQTLTDEIRERVGDLAHVE
TILNQSSDDIQRAESLLEQARRVSKEATEVRDTAEMVKQVLEEAERAQSAAAKAIKQATT
DIKGTNDLLTSVESETADSEYKLNNATQRLLRLERDVTLLREKTLNTSLSSEQTEKDAES
INKVVEQVKKDLDSELKDKYSTVEDLITQKAGGVADAKKRAELLQQEAKDLLLQASDKLQ
LLKDLEKSYEDNQKTLEDKANQLVDLEKSIKELLQEISHKVTVYSTCLF
NT seq 5370 nt   +upstreamnt  +downstreamnt
atgtttatatttcaaattgcgaccatgctatccgcaggggcgtgcgtccttgcccaggta
ggcataccggagttcagtgatgtatgcacggaggggagctgctacccggctaccggagac
cttctcattggcagagcacaccaactctccaccaactccacatgcggcctccaccggccc
gagccgttctgtatcgtcagtcatttacaggatgagaagaaatgctttttgtgtgactcc
accgacgcctacgtcaaaagcgtggtgaacaccaccaccggccaccgggtggagaacgtc
gtgaccacattcgcccccaaccgcctgaaaacctggtggcagtcagagaatggtcttgag
aaagtgaccatccagctgaacttggaggcggagtttcatttcacccacctcatcatgacc
ttcaagaccttccggcctgctgctatggtgattgagcgctcggctgactttgggaagaac
tggcaagtgtaccgctactttgcatacgactgcgcggcggcataccctgccatatccccg
gggcccatgcagaaagtggatgacatcatctgcgattcgcattactccgacatagagccg
tcgacagagggagaggtcatcttccgagttttggatccagctttccgtattgaagatccc
tacagccccagaatccaaaacatgttgaagatcaccaacctgagggtgaagttcaccaag
ctgcacaccctgggagacaacctgctggactcccgcatggagatcaaggagaagtactac
tacgctgtctacgacatggtggtccgtggtaactgcttctgctacggacacgcctccgag
tgcgcccccgtcgacggggctggggctggggatggagtggagggcatggtccatggccac
tgtatgtgcaaccacaacaccatggggctaaactgtgagaagtgtcaggacttctaccac
gagctgccctggagaccagccaagggacgcaacaccaacgcctgtaaaaagtgtaactgt
aaccagcactcaggctcgtgtcacttcgacatggcagtttacgtctctacgggtaatgtg
agcggcggtgtgtgtgacgagtgccagcacaacaccatgggtcacaactgtgaacagtgc
aagcctttctactaccagcacccagagagggacatccgcgaccccagcatctgtgaatca
tgtaactgtgatccggtgggctctctgaatggcgggatctgtgacaggatgactgatgtg
tcgtccggactgatcactggccagtgtcgctgcaaacccaatgtggagggagagcgctgt
gaccagtgccagcaggcccattatggcctgggtgaccaccctctgggctgcctggcctgc
acctgtaataccctggggacagttcctggagggagtccgtgtcacacagactcaggagat
tgtttctgcaaaagcctggtcacagggagagactgtgaccagtgtatgcctcagcactgg
gggctcagcaatgatatggatggctgcagaccatgtgactgtgacctgggtggagccctt
aataacgactgttctcaggagactggccagtgtgcgtgtagagaacacatgtttggccgg
cgctgtgaccaggtggagtcaggcttctacttcatcgccctggaccactacacctacgag
gccgaggacgccaagtttggacctggtttgacagtagtgcagagacctcgcccgcaggac
cgtagccccacctggacagggataggttttgtcaacgttcccgagggggcctacctggag
ttctccattgacaacatcccccactccatggagtacgacgtcctcatccgctacgagcct
cagttaccggaccagtgggaggaggtgttgatgacggtgatgcggcccagtttgatttca
gcagacagtcgctgtgccaacaccatgcctgatgacgacaaccagatgatatcccttcac
cccggatcacgatacgtggtgctccccagaccagtgtgtttcgaggcagggatgaactac
actgttcgtctgagcctgcccctctactctgcactcagtgacgttcagtccccatataca
ctcatcgactcgattgtgctgatgccccactgtaagaacctggagatcttcactggttct
gtgggaggtgacgtggccaccaacagtgcctgggacacgttccagcgttaccgctgtctg
gagaacagccagagcgtagtgaagaccccctccacagacatctgccgtaacttcatcttc
agcgtatctgctctgctgcaccagggagctaaagcatgccagtgtgacccgcagggcgcc
ctcagcacggtgtgtgacgccagcggcgggcagtgtcagtgtcgccccaacgtggtgggc
aggaactgtgacaagtgtgcccctggcacctacctgttcggacccagcggctgcagaccc
tgtgattgcaatccccagggatcgaaggatgcgttctgccacgaggccacaggccagtgt
gtgtgtatccccggggcatacagccgtcagtgtgaccgctgtctgccgggtcactggggc
ttccccaactgtcgcctctgcacctgcaacggccacacagagcagtgcgacccctactcc
ggaaaatgcctgggctgccgagaacagaccaccggacacaactgcgagaggtgtctggat
ggttactatggcgaccccgtcctgggttcaggggaccattgtcggctctgtatgtgtccg
gatgggcccagaagcgggcgacagtttgccagtggatgttaccgcggtctggactcccct
taccaggtgttctgtatctgcagccccgggtacagaggtgccaggtgtgaggagtgtgcc
ccaggttactatggaaacccccatgagaacggcgggcactgccaaccctgccagtgcaac
aacaacattgacatgctggatcaggagtcctgtaatgccagaacgggtgaatgtctcaaa
tgtctctatcacaccgagggtcagggctgtcacagctgcaagctgggttactatggagat
gccctcacacaaaactgcagaaagtgtgtttgtaaccacctgggtaccaatccagccacg
tgcccggcggtgggtgactgccactgtgatctgggcagcgggcagtgccagtgtctaccg
aatgtggtgggtcagcactgtgaccagtgtgcccccgacacctggaacatggccagtgag
acgggctgcgatgcctgcgactgtgaccccaaccactcatttgggacttcctgcaatgag
ctgagtggccaatgctcctgtaagcctggctttgggggtaaaacgtgtcgggagtgcaga
gagctgttctggggagaacctgaagtgaaatgcaatgcatgtgactgtgactcgcgaggc
atcgccgagcagcagtgcaacaaggccaacggtcactgcgtgtgcgtggagggcgtgtct
ggtccccgctgtgacgtctgcacccgtggctactctggcaccttcccctactgcgaacgc
tgccaccagtgcttcgccgactgggacctggtcgtgggtcagctgaccaatcagacccac
aggctggtcaacaaggtgaacaccatcaaggctagcggcatcaccggaccctataaacac
accatagataacatggagcagagtgccggggccataagaactatcctggcccagaacccg
gctacacagccactgtcagagatacagcagctactggagcaggccacagatctaatggaa
aagatgagcaacaagctgaacctcactgaggaggcgctggcccaggtatcatctgatgac
aacagcaccaacaccaaacttgactccctcaaagaggacacccagaagctggatcgcacc
gtcaaggatctgctggaccaagtggagttcatcaagaacactgacattcggggagcgaca
gacagtgtcaccaagtactaccagcagtctctggctgcagatgctcgcgccaacgcctcc
actagtggcccaggcaaccctgtggagagctctgccattttacggaaagccacagaggac
aagatgaacgacactagggaggagttccacaggaggcaggaagaacacgccaagagactg
gacgacttggcaggacaactggagacactggacctatcagaactcagcgtgaagacgtgt
ggcagcccagctgatgaggcgtgtgtggactctcagtgcggggggctgagctgtgtggac
tccaaggggaacaggaggtgtggtggcgaggggtgcgacggtttggtcaacctggccaat
aacgcctggcagaaggccaagggctttgaccaggagatcctcacggccatggaggaagtg
gacaagctcgccaaaatggtgtcggaggccaaggtgaaggcggatgaggctaagctgagt
gcccagaacgtgctgctgaagaccaacggtaccaagcagcgtgtggaccagagcaacgag
gagctgcgcagcctcatccgacagatcagagacttcctcacacaggatgcagcggacctg
gagagcattgaggcagtggccaacgaggtgctggccatgcagatgcccaccacgccagcc
cagctccaaaccctgacagacgagatcagggagcgagtaggagacctagcccacgtggag
accatccttaaccagagctccgacgacatccagagagccgagagcctactggagcaggca
cgcagagtcagtaaagaggcgacagaggtgagggacacagcagagatggtgaagcaggtt
ctggaggaggctgagcgtgcccagagcgcagcggccaaggccatcaaacaggccaccacc
gacatcaaaggcaccaatgacctcctgacctcagtggagtcggagacagcggactcggag
tacaagctgaacaatgccacccagaggctgctgcggttagagcgagacgtcacgctgctc
agagagaagacacttaacacctcactcagctctgaacaaactgaaaaagacgcagagagc
atcaacaaagtggttgagcaggtcaaaaaggacctggactcggagctgaaggataagtac
agcaccgtggaggacctgatcacacagaaggccgggggcgtggccgacgccaagaagagg
gcggagcttctacagcaggaagccaaagacctgctgctacaggccagcgacaagctgcag
ctactgaaagatttagagaagtcgtatgaggacaaccagaagactctggaagacaaggcc
aaccaattggtagatctggagaagtccatcaaagagcttctgcaggagatcagtcacaaa
gtcactgtctacagcacctgtctgttttaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (118)   
   KEGG ORTHOLOGY (1)   
   RefGene (114)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (132)   

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