KEGG   Salmo salar (Atlantic salmon): 106590411
Entry
106590411         CDS       T04363                                 
Name
(RefSeq) interferon regulatory factor 8-like
  KO
K04693  interferon regulatory factor 9
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04217  Necroptosis
sasa04620  Toll-like receptor signaling pathway
sasa04621  NOD-like receptor signaling pathway
sasa04625  C-type lectin receptor signaling pathway
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    106590411
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    106590411
   04621 NOD-like receptor signaling pathway
    106590411
   04625 C-type lectin receptor signaling pathway
    106590411
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106590411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sasa03000]
    106590411
Transcription factors [BR:sasa03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    106590411
SSDB
Motif
Pfam: IRF IRF-3
Other DBs
NCBI-GeneID: 106590411
NCBI-ProteinID: XP_014036881
UniProt: A0A1S3QAB2
Position
ssa29:complement(25025477..25031126)
AA seq 431 aa
MASGKIRSTRRLRAWMVEQVSSGKYPGLIWDDDDKTMFRIPWKHAGKQDFRSEVDGAIFK
AWAVFKGKLSEGGHADPASWKTRLRVALNKSPEFREEPERSQLEISEPYKVYRLVPINEQ
ALGSVDMKVQARAGGRKRRSCDSDIEVEEEVVKVKQMKEVTTSLPITMQSVQEIEESLLT
IQLDQVEPSVMVKSAGTVNEIQVNFTIETVPPPGAQDSFHVLVKYMGEEVLKRGVMGSDV
RIAYLPSSPVPPTLMVAGFPRIPLPDPPSTLTSSIGPQFQALSTLLPFLEKGVILTSTRT
GVYAKRYCQGQVFWTGPHSATAGPHKMNHAVEPVRLFNREAFRMELDHFSSYGGDPPQCG
FTLCFSDKEDPSSKLIITQITLPWAQQQVKEAEDFRESMTYFRNITSESGEVTINLVSGS
LLSEILGTSLP
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggcatctgggaaaattcgctccacgcgcagactacgcgcttggatggtagaacaggtc
agcagtgggaagtaccctggcctgatatgggacgacgacgacaagaccatgttccgtata
ccatggaaacacgccgggaaacaagacttccgcagcgaagtggatggtgccatcttcaag
gcgtgggcagtgtttaaggggaagttgtctgaggggggtcatgcggaccctgcctcctgg
aagacgcggctgcgagttgctctcaataagagcccggagttcagagaggaacccgagagg
tcacagctggaaatctccgaaccatacaaagtctaccgcctcgtacccatcaacgaacaa
gcattggggagtgttgacatgaaggttcaagccagagcaggggggaggaagagaaggagc
tgcgattcagacatcgaggtggaggaagaggtggtgaaggtcaaacagatgaaagaggtt
accacctccctaccaatcaccatgcagtctgttcaggagattgaggaaagtcttcttaca
atccagctagaccaggttgagccctcggtcatggtgaagagtgctgggacagtcaatgag
atccaggtgaacttcacaatcgagaccgtccctccccctggagcccaggactctttccat
gtcttagtgaagtacatgggagaggaggtgcttaaacgtggggtcatgggcagcgatgtc
cggatcgcctatctgccctcctcgcccgttccccccaccctgatggtggctgggttcccc
cgcatccccctgcccgaccccccctccaccttaacctccagcatcgggccccagttccag
gccctctccaccctgctgcccttcttggagaaaggggtgatcctgacctccacgagaaca
ggggtctatgctaagcgctactgccagggccaggtgttctggacagggccacattcagcc
acggcgggaccccacaagatgaaccatgctgtggagcccgtgcggctcttcaatagagag
gctttcagaatggagctggaccacttcagcagctacggaggagaccctccgcagtgtggc
ttcaccttgtgtttcagtgacaaagaggacccatccagcaaactcatcatcacacagata
accctaccctgggctcagcagcaggtcaaggaagctgaagacttccgggagtcaatgacc
tacttccgcaacataaccagcgaatcaggagaggtcaccatcaacctggtatcaggttca
ttgctatccgagatccttgggacgtccctaccttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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