KEGG   Salmo salar (Atlantic salmon): 106604018
Entry
106604018         CDS       T04363                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03030  DNA replication
sasa03410  Base excision repair
sasa03420  Nucleotide excision repair
sasa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106604018 (rfc3)
   03410 Base excision repair
    106604018 (rfc3)
   03420 Nucleotide excision repair
    106604018 (rfc3)
   03430 Mismatch repair
    106604018 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sasa03032]
    106604018 (rfc3)
   03036 Chromosome and associated proteins [BR:sasa03036]
    106604018 (rfc3)
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106604018 (rfc3)
DNA replication proteins [BR:sasa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106604018 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    106604018 (rfc3)
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106604018 (rfc3)
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106604018 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    106604018 (rfc3)
SSDB
Motif
Pfam: DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 AAA_11 ABC_tran AAA_5
Other DBs
NCBI-GeneID: 106604018
NCBI-ProteinID: XP_014053824
UniProt: A0A1S3RQ38
Position
ssa04:complement(79732527..79734990)
AA seq 356 aa
MSLWVDKYRPTSLGKLDYHKEQANQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTVTAPSKKKIEINTIASNYHLEVNPSDAGNSDRVVIQELIKTMAQAQQ
IQTSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRIILCCNSTSKVIGPIRSRCL
AIRVPLPSTEEVCNVLSTVCRKEGLLLPTELSKRISEKSGRNLRKALLMCEACRVQQYPF
SADQDIPETDWEVYLRETANAIVSQQSPQRLLEVRGRLYELLTHCIPPEIIMKGLVTELL
GNCDGQLKAEVTHMAAHYEHRLQQGNKAVYHLEAFTARFMAIYKKFMEDGLDAMSF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtgggtggacaaatacagacctacctctctggggaaattggactaccacaaa
gagcaagctaatcaactgaaaaacctggtccaatgtggggacttccctcatctgttggtg
tacgggccgtccggagcagggaagaagacccgtatcatgtgtctgctgagagaactgtac
ggagctggggtggagaaactacgcatagaacaccagaccgttacggctccttctaagaag
aagattgagatcaacaccatagccagtaactaccacctggaggtcaacccaagtgatgct
ggtaacagtgaccgtgtggtcatccaggagctgatcaagactatggcccaggctcaacag
atccagaccagcacccagagggagttcaaagtggtcctgttgacagaggtggaccgcctc
actaaggatgcccagcatgcattgcgtcgtaccatggagaagtacatgtccacctgccgg
atcatcctctgctgtaactccacctccaaagtcattggaccaatcaggagcaggtgtctg
gccatcagggtgcccctgcccagtacagaggaggtgtgtaatgttctgtctacagtgtgt
aggaaggagggtctgcttctccccactgagttgtccaaacggatctcggagaagtctgga
cgcaacctccgcaaagcactgctgatgtgtgaggcgtgcagagtgcaacagtacccgttc
tcagcagaccaggacatcccggagaccgactgggaggtttacctgagagagacggccaat
gccatcgtcagtcagcagagtcctcagaggttgttagaggtgagggggagactgtatgag
ttgctgactcactgtattcctcctgagatcatcatgaagggcctggtaacagagctgcta
ggtaactgtgacggacagctgaaggcagaggtgactcacatggcagcccactacgaacac
cgactgcagcagggcaataaggccgtctaccatctagaggcattcaccgccaggttcatg
gccatctacaagaagttcatggaggacgggctggacgccatgtcgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (46)   

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