KEGG T04363: 106611784

Salmo salar (Atlantic salmon): 106611784

Entry

106611784         CDS       T04363

Symbol

pcdh10

Name

(RefSeq) protocadherin 10

K16499

protocadherin delta 2

Organism

sasa Salmo salar (Atlantic salmon)

Brite

KEGG Orthology (KO) [BR:sasa00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:sasa04515]
    106611784 (pcdh10)
Cell adhesion molecules [BR:sasa04515]
Cadherins
  Protocadherins
   106611784 (pcdh10)

SSDB

Motif

Pfam:

Cadherin Cadherin_2 Cadherin_C_2 Cadherin_3

Other DBs

NCBI-GeneID:

106611784

NCBI-ProteinID:

XP_014067838

UniProt:

A0A1S3SU15

Position

ssa09:61831177..61843193

AA seq 1032 aa
MIVLFLLLCITNGVVSQIRYSVPEEADHGTFVGNIAEDLGLDMTKIASRRFQVVPSSRTP
YLEVNMENGILFVNERIDREQICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYSVSLQE
NAPVGTLVIQLNATDLDEGQNGEIVYSFSNHISSRVKDLFAIDARTGRIEVCGEVDFEES
SLYQIFVQAKDLGPNAVAAHCKVLVKVTDVNDNAPDITFSTVTESVSERAAPGTVIALLS
VTDKDAEENGKIHVEILGDVPFKLKPSFRNYFTIVTDGPLNRENADSYSVTVVAKDTGTP
SLATSKSIKVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDPDVGQNALISYS
IMDCDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQAKDAGSPELSSNATVKV
IIVDQNDNPPSVIAPLGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSTKRDPNQMYDLLIEVRDHGQPPLSSTASVFVVLVDSVVE
DHRERGTAKSKETTLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCLTSDCC
LGCATCCSRHARARKKKLSKSDIMLVQSANVTGAGTAQVPVEESGSFGSHHQNQNYCYQV
CLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSSETKHQRA
ELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSTGADLFSNCTEE
CKALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFESQEQTGDKSFSTFGK
ETPLSHLYQNHYQNHHKNHLHLSHHHATHANQATLERREFEALLSSTRAPYKPAYRGKGF
ASSFRVDIPETA

NT seq 3099 nt +upstreamnt +downstreamnt
atgattgtgctattccttcttctgtgtattacaaatggagtggtctcgcagatacgctac
tctgtgccggaggaggcggatcacggcacgttcgtagggaatattgccgaggaccttgga
ctggacatgaccaaaatcgcctcgcggcgcttccaggtggtgcctagctcgcggacgccg
tacctggaagtgaacatggagaacgggattctgttcgtcaacgaaagaattgaccgggag
cagatctgcaagcagagtgccagctgcctattacaccttgaagtgtttctggagaaccca
cttgagctgttccgcgtggagatagaggtcgtggatatcaatgacaatccgcccagcttc
cccgagaccgacatcacggtggagatttcagagagcgctacccctggtacccggttccct
cttgagagtgcattcgatccggacgtgggctccaacgcgctgcgcacatacgacatcacc
accaataactacttctacctggatgtgcagacgcagaccgacgggaacaaattcgcagag
ctggtgctggagaagccgctggacagggagcagcaggcggcccacaggtacgtgctaact
gctgtggacggggggcagcctccacggacaggcactgctctgctggtggtcaaagtgctg
gattctaacgacaacgtgcccgtgtttgaccagccggtgtattcggtgagccttcaggaa
aacgcaccggtggggaccctcgttatccaactgaacgccaccgacttggacgaggggcag
aacggggagatagtgtattcattcagcaaccacatatccagccgcgtcaaggatctgttc
gccatagatgcgcgcactggacgaatcgaggtgtgcggcgaggtggattttgaggagagc
agcttatatcaaatattcgttcaggcgaaagatcttggacccaatgcagtggctgcacac
tgtaaagttctggtgaaagtgacagacgtaaatgataatgctcctgatatcacctttagc
accgtgactgagtcggtgagcgagagggcagccccaggtaccgttatagccctgctgagc
gtgacggacaaagatgctgaggaaaacggaaagattcatgttgaaatcctcggtgacgtc
ccgttcaaactcaaaccctcctttaggaactatttcaccattgtaacagacggacctcta
aatagggagaatgctgactcttattcagtgactgtagttgccaaggatacagggacccct
tccctcgcaaccagtaaatcaatcaaagtgcaagtgtcggatgaaaatgacaatgcgcca
acgtttacgcagcccatatatgatgtttatgtgactgaaaataatgtgccaggtgcttat
atccacgctgtgacagctttggacccagacgttggacagaacgctctaattagttactcc
ataatggattgtgatattcagggtatgtctgtgaaaacatatgtgtcaatcaacgaggaa
actggctacctttacgcactcagatcattcgattacgagcagcttaaagacttcactttc
atggttcaggcgaaagatgcaggtagccccgagctctcctcgaacgcgacggtcaaagtg
atcatcgtagaccagaatgacaaccctccctcagtcattgctcctctgggtaaaaatggc
actgcgagagagccgctgccccgctccgccgagcctggctacctggtgacccgtatcgtc
gccatggacgcagatgacggcgagaacgcacggctctcctacagcatccagcgggggaac
gagaacggcatgttccgtatggactggaggacaggagagctgcgcactgcccggcgcgtc
tcaaccaagcgggacccgaaccagatgtatgacctgttgatagaggtgagggaccacggc
cagccacccctctcctccaccgccagtgtgttcgtggtgctggtggacagcgtggtggag
gaccaccgggagaggggcaccgccaagtccaaggagaccactctggaccttaccctcatc
ctcatcatcgccttgggctctgtctccttcatcttcctcctggctatgatcgtgctggcc
gtgcgctgccagaaggacaaaaagctaaatatctacacgtgcctcaccagtgattgttgc
cttgggtgcgccacatgctgcagcaggcatgcgcgagcccgcaagaaaaagctcagcaag
tctgatatcatgctggtgcagagcgccaacgtcaccggggccggtacagcccaagtgccc
gtggaagagtccgggagcttcggctctcaccaccaaaaccagaactattgctaccaggta
tgtctgacaccggagtctgccaaaaccgacctcatgttcctaaagccgtgtagcccatct
aggagcacagacacggaacacaacccgtgcggggccatagtgacagggtacactgaccag
cagcctgacatcatatcaaacggcagcattttatcaagcgagaccaaacatcagcgagcc
gaactcagttacctggtggacagacctcggcgtgtgaacagttcggctttccaagaagcg
gatctcgttagctctaaagacagtggtcacggtgacagcgaacagggcgacagtgaccat
gacgccaccaatcgaggtcactctacgggcgctgatctcttctctaactgcacagaggag
tgcaaggctctgggccactccgaccgctgctggatgccctccttcgtgccctccgacggg
cgccaggcggcagactaccgcagcaacctgcacgtgccaggcatggactccgtgcccgac
actgaggtatttgaaagccaagagcaaacgggcgataagtcattctctacctttggcaaa
gagacgcccctcagccacctctaccaaaaccactaccaaaaccaccacaaaaaccacctc
cacctcagccaccaccatgccacccacgccaaccaagccacgctagagaggagagagttt
gaggcgcttctgtctagcacgcgagcgccttacaaacctgcctatcgaggaaaagggttt
gctagctcctttcgcgtggacataccagagactgcatga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (46)   

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