KEGG T00346: SYN

Syntrophus aciditrophicus: SYN_01854

Entry

SYN_01854         CDS       T00346

Name

(GenBank) helicase

K03726

ATP-dependent DNA helicase [EC:5.6.2.4]

Organism

sat Syntrophus aciditrophicus

Brite

KEGG Orthology (KO) [BR:sat00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sat03400]
    SYN_01854
Enzymes [BR:sat01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SYN_01854
DNA repair and recombination proteins [BR:sat03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     SYN_01854

SSDB

Motif

Pfam:

DEAD Helicase_C ResIII Helicase_dom4_arc HTH_61 Terminase_6N

Other DBs

NCBI-ProteinID:

ABC77546

UniProt:

Q2LTY3

Position

complement(1733949..1736597)

AA seq 882 aa
MRILELSRYNIPEKIVEAWTTEMGEELLPVQERAIKRHQVLDGKSLIISSPTTSGKTFIG
EIAAVKGVMEKKKVIYLVPLKSLAEEKYLDFRKKYESFGIRTVVSSRDHREHDRAIEAGE
FGIAVIVYEKMAQLMVKNPFLLKNIALVVVDELQEIGDPDRGPGLEITLTKIVSSPHRPQ
VIGLSAVLGNTDALARWLGADLLSFDKRPVELHEGVLYKGVFHYRTHNTLEKNSEPLAEI
DFEDPTEVLLANVAHLAGEGDQVLVFLPSKLDTMLFAGLLTERVDLACAAGTLDELALLE
ETSLKEKLSSCLGKAVAFHHADLSRDERSVIEKYARKGEIKVIFCTTTLSMGVNLPATTV
FLHTQKWETDGRDHMILTPIGWAEYENISGRAGRLGFGRDFGRSITIAGNDYEYEMLWEN
YIDGQVGMLTSRLDGKGMENHLVNIVASGVARNREEIESFLSHTFQGLFESRENTRKGME
KALRFATDRRFIEEDGRGEMAVSSLGVVVASKGITCLTALDLSSFLKEVGDRELTDLEIL
HAAASSDDGKKIYMQIAGHEHRSRKYEQLVREEISGRQEYLGTLLSQVVKSPLLVTKNKA
RTLKLTLLLERWIRGKETPSLERDFESYFGTIAAAAEGLSWIIDAASLVAQSIGSPKALQ
DRLSILSERLLYGVEEKGLELARLRVRGLGRAGICSLVREGFDSRKAIRETPVTVLAAMI
PERIAISLKEAVESGHKNPPQKEEMSAETSEPDNTFICRDRIEITGKPIEKRNLVMINGS
PMGITNRSLELLLRFAVAVKKDGRGWVHREDLTPGMGATQLVSRLRNELRSLTLKKDGKI
IENDGSGCYRLSIPPRNVFFDRESLLQHWNAVIKDAAASISE

NT seq 2649 nt +upstreamnt +downstreamnt
atgagaattttggaattgagccgttacaacatcccggagaagatcgtggaagcctggact
accgagatgggggaagagcttctgccggtgcaggagagggccatcaagcgccaccaggtc
ctcgacggaaaaagtctgatcatctccagcccgacaacgtccgggaagaccttcatcggg
gagatcgccgccgtgaagggcgtcatggagaaaaagaaagtcatctacctcgtccccctg
aaatccctcgcggaggagaagtatctcgattttcggaaaaagtatgagtcattcgggatc
aggaccgtggtctcctccagggatcaccgggaacatgaccgggcgatcgaggcgggcgag
ttcggaatagcggtcatcgtttacgagaagatggcgcaactcatggtcaagaaccccttc
ctcttgaaaaacatcgccctggtggtcgtcgacgaactccaggaaatcggcgacccggac
cggggaccggggctggagatcaccctgaccaagatcgtctcctcgccgcatcgcccgcag
gtcatcgggctctcggccgtcctggggaacaccgatgccctcgcccggtggctgggtgcc
gacctcctttcctttgacaagaggccggtcgagctgcacgagggcgtgctctacaagggg
gttttccattacaggactcacaataccctcgaaaagaattccgagcctctcgccgaaatt
gattttgaggatccgacggaggttctccttgccaatgtggcccacttggcgggggagggc
gaccaagttctggtattcctcccgagcaagctggataccatgctttttgccgggcttctc
acagaaagggtcgacctcgcctgtgccgcgggcacccttgacgagctcgctctcctggag
gaaacgtccctaaaggaaaaactctcatcctgcctggggaaagcggtcgccttccatcat
gcagacctgtcgagggacgaacgcagcgtcatcgagaaatacgcccgaaagggggaaatc
aaggtcatcttctgcacgacgaccctgtccatgggcgtcaatcttcccgccacgacggtc
ttcctgcacacgcagaaatgggagaccgacggccgcgaccatatgatcctcaccccgatc
gggtgggcggaatacgaaaacatcagcggccgcgccggaaggctggggttcggccgggat
ttcggaaggtcgatcaccatcgccggaaacgactacgagtacgagatgctctgggagaat
tacatcgacgggcaggtgggaatgctcacctcgcggctcgacggcaaaggcatggaaaac
cacctcgtgaacatcgtcgcctccggcgtcgccaggaacagggaagagatcgaatcattt
ctttcccatacgttccaggggctgttcgagagcagggagaataccaggaaaggcatggaa
aaggctctccggttcgccactgacaggaggttcatcgaggaggacggccggggggagatg
gccgtctcctcgctgggcgtcgtcgtcgcctcgaagggcataacctgcctcacggcgctg
gacctgtcgtcttttctgaaagaggtcggggacagggagctcacggacctggaaattctt
catgccgccgcttcgagcgatgacgggaagaaaatttacatgcagatcgccgggcatgag
cacaggagcaggaagtacgagcagctggtcagggaagagatctcaggccggcaggagtac
ctgggcaccctgctgtcccaggtcgtcaagagccctcttctcgtcacgaagaacaaggcc
aggactctcaaactcacccttcttctcgaaaggtggatccgggggaaggaaacccccagc
ctggagagggatttcgaatcgtatttcggcacgatcgccgccgcggcggaggggttgagc
tggatcatcgatgccgcctcgctcgttgcccagagcatagggtcgcccaaggccctgcag
gacaggttgtccatcctttccgagaggcttctctacggggtggaggagaaagggcttgaa
ctggcaaggctgagggtccggggcctgggccgggcgggaatctgcagtctcgtcagggag
ggcttcgacagcaggaaagccatccgggagacgcctgtaacggtactcgctgcgatgatc
ccggagaggatcgcgatcagcctcaaggaggcggtggaatcgggacacaagaatccgcca
caaaaagaagaaatgagcgccgagacgtctgaacctgacaacacgttcatttgccgcgac
cggatcgagatcacgggaaagccgatcgagaaacgcaatcttgtgatgatcaacggctcg
ccgatggggattaccaatcgatccttggaattgctcctgcgttttgccgttgcggtgaag
aaggacgggcggggatgggttcacagggaggacctgactcccgggatgggagcgacacag
ctcgtctcgcggctgaggaatgagctccggagccttaccctgaagaaggacgggaaaatc
atcgagaacgacggatcagggtgttaccgcctttcaataccgcctcggaatgtgtttttc
gacagagaaagccttcttcagcactggaatgccgtgataaaggatgcggcggcttccatt
tcagaatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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