KEGG T02886: SAZ172

Staphylococcus aureus subsp. aureus Z172 (MRSA/VISA): SAZ172_1254

Entry

SAZ172_1254       CDS       T02886

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

sauz Staphylococcus aureus subsp. aureus Z172 (MRSA/VISA)

Brite

KEGG Orthology (KO) [BR:sauz00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sauz03032]
    SAZ172_1254 (topA)
   03400 DNA repair and recombination proteins [BR:sauz03400]
    SAZ172_1254 (topA)
Enzymes [BR:sauz01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SAZ172_1254 (topA)
DNA replication proteins [BR:sauz03032]
Prokaryotic type
  DNA Topoisomerases
   SAZ172_1254 (topA)
DNA repair and recombination proteins [BR:sauz03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SAZ172_1254 (topA)

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 RNA_POL_M_15KD Toprim_2 Auto_anti-p27 Porphyrn_cat_1

Other DBs

NCBI-ProteinID:

AGY89354

Position

1325149..1327218

AA seq 689 aa
MADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDTEDNYEPKYITIRGK
GPVVKELKKHAKKAKNVFLASDPDREGEAIAWHLSKILELEDSKENRVVFNEITKDAVKE
SFKNPREIEMNLVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFKPEEYWTIEGEFRYKKSKFNAKFLHYKNKPFKLKTKKDVEKITAALDGDQFEITN
VTKKEKTRNPANPFTTSTLQQEAARKLNFKARKTMMVAQQLYEGIDLKKQGTIGLITYMR
TDSTRISDTAKVEAKQYITDKYGESYTSKRKASGKQGDQDAHEAIRPSSTMRTPDDMKSF
LTKDQYRLYKLIWERFVASQMAPAILDTVSLDITQGDIKFRANGQTIKFKGFMTLYVETK
DDSDSEKENKLPKLEQGDKVTATQIEPAQHYTQPPPRYTEARLVKTLEELKIGRPSTYAP
TIDTIQKRNYVKLESKRFVPTELGEIVHEQVKEYFPEIIDVEFTVNMETLLDKIAEGDIT
WRKVIDGFFSSFKQDVERAEEEMEKIEIKDEPAGEDCEICGSPMVIKMGRYGKFMACSNF
PDCRNTKAIVKSIGVKCPKCNDGDVVERKSKKNRVFYGCSKYPECDFISWDKPIGRDCPK
CNQYLVENKKGKTTQVICSNCDYKEAAQK

NT seq 2070 nt +upstreamnt +downstreamnt
ttggcagataatttagtcattgttgaatcgcctgcaaaagcaaaaaccattgaaaagtat
ttaggtaagaaatataaagttatagcttcaatgggacacgtcagagacttaccaagaagt
caaatgggtgtcgacactgaagataattacgaaccaaaatatataacaatacgcggaaaa
ggtcctgttgtaaaagaattgaaaaaacatgcaaaaaaagcgaaaaacgtctttctcgca
agtgaccccgaccgtgaaggtgaagcaattgcttggcatttatcaaaaattttagagctt
gaagattctaaagaaaatcgcgttgttttcaacgaaataactaaagacgctgttaaagaa
agttttaaaaatcctagagaaattgaaatgaacttagtcgatgcacaacaagcgcgtcga
atattagatagattagttggctataacatctcgccagttctttggaaaaaagtaaaaaaa
gggttgtcagcgggtcgagttcaatctgttgcacttcgtttagtcattgaccgtgaaaat
gaaattcgaaactttaaaccagaagaatattggactattgaaggagaatttagatacaaa
aaatcaaaattcaatgctaaattccttcattataaaaataaaccttttaaactaaaaacg
aaaaaagatgttgagaaaattacagctgcattagatggagatcaattcgaaattacaaac
gtgactaaaaaagaaaaaacgcgtaatccagcaaacccatttacaacttctacattacaa
caagaggcggcacgtaaattaaactttaaagcaagaaaaacaatgatggtcgcacaacaa
ttatatgaaggtatagatttgaaaaaacaaggtacgattggtttaataacatatatgaga
accgattctacacgtatttcagatactgccaaagttgaagcaaaacagtatataactgat
aaatacggtgaatcttacacttctaaacgtaaagcatcagggaaacaaggtgaccaagat
gcccatgaggctattagaccttcaagtactatgcgtacgccagatgatatgaagtcattt
ttgacgaaagaccaataccgattatacaaattaatttgggaacgatttgttgctagtcaa
atggctccagcaatacttgatacagtctcattagacataacacaaggtgacattaaattt
agagcgaatggtcaaacaatcaagtttaaaggatttatgacactttatgtagaaactaaa
gatgatagtgatagcgaaaaggaaaataaactgcctaaattagagcaaggtgataaagtc
acagcaactcaaattgaaccagctcaacactatacacaaccacctccaagatatactgag
gcgagattagtaaaaacactagaagaattgaaaattgggcgaccatcaacttatgcaccg
acaatagatacgattcaaaagcgtaactatgtcaaattagaaagtaagcgttttgttcct
actgagttgggagaaatagttcatgaacaagtgaaagaatacttcccagagattattgat
gtggaattcacagtgaatatggaaacgttacttgataagattgcagaaggcgacattaca
tggaggaaagtaatcgacggtttctttagtagctttaaacaagatgttgaacgtgctgaa
gaagagatggaaaagattgaaatcaaagatgagccagccggtgaagactgtgaaatttgt
ggttctcctatggttataaaaatgggacgctatggtaagttcatggcttgctcaaacttc
ccggattgtcgtaatacaaaagcgatagttaagtctattggtgttaaatgtccaaaatgt
aatgatggtgacgtcgtagaaagaaaatctaaaaagaatcgtgtcttttatggatgttcg
aaatatcctgaatgcgactttatctcttgggataagccgattggaagagattgtccaaaa
tgtaaccaatatcttgttgaaaataaaaaaggcaagacaacacaagtaatatgttcaaat
tgcgattataaagaggcagcgcagaaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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