KEGG   Shewanella amazonensis: Sama_0811
Entry
Sama_0811         CDS       T00445                                 
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
saz  Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:saz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:saz03400]
    Sama_0811
Enzymes [BR:saz01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     Sama_0811
DNA repair and recombination proteins [BR:saz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    Sama_0811
 Prokaryotic type
    Sama_0811
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-ProteinID: ABL99018
UniProt: A1S3R2
Position
995865..997292
AA seq 475 aa
MNTLVWFRQDLRTIDNQALTRACEDANARGGKVHALFIASPGQWQRHDMGVRQQRFLLAN
LNALGEELASMGIPLSLLKVDFFYQTAAALKAFCKEHGISSIFAGAQIEIDERRRDQALL
DKGFPLQLTDEHCMLPPGSVVTQGQRDQGGAMYRVFTPFARRWREIAASRSLWPIPAPAS
VATPVVFTPFAFWGDINDDPALDKWPVGQDAALEKLSRFRELGMGRYGENRDFPAIDGTS
SLSPYLALGVISPRQCLAALLEDFPDVFVNESSPARPWLNELVWREFYRHLLVAFPGLSM
AKNFNPLGDGIRWRNDETEFEAWKHGRTGYPLVDAAMRQLNQTGWMHNRLRMVVASFLTK
HLLIDWRWGERYFREQLIDGCLAANNGGWQWAAGTGCDAQPYFRIFNPMSQSEKFDPEGR
FIRKYLPELAQWPTRSLHQASGPGLFDSSGYPSPIVEHTQARVRALDVMAVMKKG
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgaatacacttgtctggttcaggcaggatcttcgcaccatagataaccaggcgctgacc
cgggcgtgtgaagatgccaacgcccgtggtggcaaggtgcatgcgctctttatcgccagt
ccgggccagtggcaacggcatgacatgggtgtgcgtcagcagcgatttttactggctaat
ctcaatgcgttgggtgaagagcttgccagtatggggattccgctgtcgttgctgaaggtg
gattttttttatcaaaccgcagcggccctcaaggcgttttgtaaagaacacggtatctcc
agcatcttcgccggggcgcaaatcgagattgatgagcgcaggcgcgatcaggcacttctg
gataaaggcttcccgctgcaactgaccgatgagcactgcatgctgccccccggcagtgtg
gtcactcagggacagcgggatcagggaggcgccatgtaccgggtatttaccccatttgcc
cgtcgctggcgtgaaatagccgcttcccgctcgctttggcctattcctgcgcccgcgtct
gtggcaacgccggtggtattcacccccttcgcgttttggggagatattaacgatgatcct
gcgcttgataaatggcctgttgggcaggatgcggcattggaaaaactatcgcgttttcga
gagcttggcatgggccgctacggcgagaatcgcgacttcccggccattgacggcaccagc
agtctgtcgccctatctggcgctcggggtgatatctccccgacagtgtctggcggcgctg
ctggaagactttcccgacgtctttgtgaatgaatcctcaccggcccgtccttggctgaat
gagttggtgtggcgcgaattttaccggcatctgctggtggctttcccgggtctgagcatg
gcaaagaactttaaccccctcggtgacggcattcgctggcgcaatgatgaaacagaattt
gaggcctggaaacacggccgtaccggctatccgctggtggatgctgcaatgcgacaactt
aatcaaaccggctggatgcacaaccggctcaggatggtggttgccagctttctaaccaag
catctgcttatcgactggcgctggggtgagcgatattttcgcgagcagctcatcgatggt
tgccttgcggctaacaacggtggttggcagtgggccgccggcacaggttgtgatgcccag
ccttactttcggatctttaaccctatgagtcagtcggaaaaatttgatcccgaaggacgc
tttatccgtaagtacctaccagaattagcgcagtggccgaccaggtcattgcaccaggca
agtgggccggggctgtttgattccagcggctatccgtctccgattgttgagcacacccaa
gcccgagtcagggcgctggatgtgatggccgtgatgaagaagggttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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