KEGG   Shewanella amazonensis: Sama_0960
Entry
Sama_0960         CDS       T00445                                 
Name
(GenBank) NusA antitermination factor
  KO
K02600  transcription termination/antitermination protein NusA
Organism
saz  Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:saz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:saz03021]
    Sama_0960
   03009 Ribosome biogenesis [BR:saz03009]
    Sama_0960
Transcription machinery [BR:saz03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     Sama_0960
Ribosome biogenesis [BR:saz03009]
 Prokaryotic type
  rRNA transcription factors
   Sama_0960
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 S1 DUF2187 KH_2
Other DBs
NCBI-ProteinID: ABL99167
UniProt: A1S461
Position
1159587..1161086
AA seq 499 aa
MNKEILLVAEAVSNEKAVPREKIFEALETALATATKKKYEGDIDVRVAIDRKTGDYETFR
RWMVVEDNGEALENPYREITLEAAQYENPEIQVGEFIEDEIESVVFDRITTQTAKQVIVQ
KVREAERAQVVEQFYDKEGEIITGVVKKSNRDSVIVDLGNNADGVLYKEDLIARESFRPG
DRVRALLYAVRPEARGAQLYLTRTKPEMLIELFRVEVPEIADEMIQVMGAARDPGSRAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQFVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWELNVMTVADMNAKHQAESAKVV
ALFMASLDVDEDFAQVLADEGFTSLEEVAYVPVAELLAIDGFDEDIVEALRERAKAAIST
RALASEEALDGAEPSEELLNLEGMDRHLAFVLASRGVVTLEDLAEQGIDDLIEIEELTEE
KAGALIMAARNICWFGEES
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgaataaagagattctgctggtcgctgaggcggtttcaaacgagaaagccgttccgcgt
gaaaagattttcgaggcgttggagacagctctggccacggcaaccaagaaaaagtacgaa
ggtgatatcgacgttcgtgtagccatcgatcgcaagaccggtgactatgaaaccttccgt
cgctggatggtggtagaggataacggcgaagcgctggaaaatccttaccgtgagatcacc
ctcgaagccgcccaatatgaaaatcctgaaatccaggtgggcgagtttattgaggacgaa
atcgagtctgtggttttcgaccgtatcactacccaaactgccaagcaggttatcgtgcaa
aaagtgcgcgaagccgaacgtgctcaggttgttgaacagttttacgacaaagaaggcgaa
atcatcactggcgtggtgaagaagagcaatcgtgacagtgtcattgtggatttgggcaac
aacgccgacggcgtgctgtacaaagaagacctgattgcccgcgaatctttccgtccaggc
gatcgcgttcgcgcactgctctatgctgtgcgtcctgaggcccgcggtgctcagttgtac
ctgacccgtaccaagcctgaaatgctgattgagctcttccgtgtggaagtgcctgaaatc
gcagatgagatgatccaggtgatgggtgctgcccgtgatccaggcagccgcgccaagatt
gctgtgaagtctaacgaccgtcgcatcgatcctatcggcgcctgtgtgggtatgcgtggt
gcccgtgttcaggccgtgtccaacgaactcggtggtgagcgcgtggatatcgtgctgtgg
gacgataacccagcgcaattcgtgatcaacgccatggcgccagccgatgtggcttctatc
atcgtggatgaagataaccactctatggacatcgccgtggaagctgattctctggcccag
gctattggccgtaatggtcagaacgtgcgtttggccactcaactgaccggttgggagttg
aacgtgatgacagtggcagacatgaatgccaagcaccaggcagaaagtgccaaggtggtt
gcgctgtttatggcgtcactggatgtagatgaagattttgctcaggtgctggccgatgaa
ggcttcacctcactggaagaagtggcttatgtaccggttgccgaactcttggcaatcgat
ggcttcgacgaggacatcgttgaagcgctgcgtgagcgcgccaaagcggccatttctacc
cgtgcgttggcgtctgaagaagcgctggacggtgcagagccgagtgaagaattgctgaat
cttgaaggcatggatcgccacctcgcgtttgtacttgcaagccgtggtgtagtgacgctg
gaagatttggccgaacaaggcattgatgatttgatcgaaatagaagaattgacagaagag
aaagccggtgcgctgatcatggctgcccgtaacatctgttggtttggcgaagagtcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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