KEGG T04690: BVH56

Abyssicoccus albus: BVH56_07300

Entry

BVH56_07300       CDS       T04690

Name

(GenBank) DNA helicase RecQ

K03654

ATP-dependent DNA helicase RecQ [EC:5.6.2.4]

Organism

sbac Abyssicoccus albus

Pathway

sbac03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:sbac00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BVH56_07300
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbac03019]
    BVH56_07300
   03400 DNA repair and recombination proteins [BR:sbac03400]
    BVH56_07300
Enzymes [BR:sbac01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BVH56_07300
Messenger RNA biogenesis [BR:sbac03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BVH56_07300
DNA repair and recombination proteins [BR:sbac03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BVH56_07300

SSDB

Motif

Pfam:

Helicase_C DEAD RQC HRDC RecQ_Zn_bind ResIII DUF3654

Other DBs

NCBI-ProteinID:

AQL57102

Position

complement(1424719..1426494)

AA seq 591 aa
MEQTLKKYFGYDQFRAGQQSIIHDLIQERKALGILPTGGGKSVCYQVPALHFEGITLVIS
PLISLMKDQVDALVAAGIQARYMNSSMSRQAIRDVEHELLRGEIKLIYVAPERFNNEYFI
NILKKVNIEMIAFDEAHCISQWGHDFRPSYRDSIEIIQSLFPSSRYIALTATATNEVKTD
ILNLLNIPPHCTTTNSIERPNLTLKVNPTYQRQKFIVDYIETHSKSSGIIYVSTRKNVES
LSEYLSSQGIDCLAYHGGMSNNDRIEQQRAFMYDEKRVIVATNAFGMGIDKSNIRFIIHY
NMPGDIESYYQEVGRAGRDGQPSECILLYSEKDIDLQQFFIDQSNGSEDYIQKQRDKLNE
MIRYKRTKQCLEAFIIHYFNPNQRLNECGRCSNCKSNDKTYDMTIEAQKIVSALYRIKDD
IASELFIQMLRGEENQEILSRELNNIRTYGILKEYKTKEVRHLLNELVYKGYIYLTDEGL
RCHESIKSILFDGMKVYTYPFKVKVKEIVDISTHKDIDQVLLDRLYNIRKKLSAKHNVAP
IMIFQDHIIKEFSKKMPTSKKEMMNISGIGNYKLKHYCPLFIDEIKSYLAQ

NT seq 1776 nt +upstreamnt +downstreamnt
ttggaacaaacattaaaaaaatattttggttatgatcaatttagagcgggtcagcaatca
attatccatgatttaatacaagaaagaaaagcacttggcatattgcctactggtggaggt
aagtcagtctgttatcaagtgcctgcattgcattttgaaggaattactcttgttatatct
ccattgattagtttaatgaaagatcaagtcgatgctttggttgcagcgggtattcaagct
agatatatgaatagttcaatgtctagacaagcaattcgtgatgttgaacatgaattatta
cgaggtgaaataaagttaatttatgttgcacctgaacgatttaataatgaatattttatt
aacatattaaagaaggttaatatcgaaatgattgcattcgatgaagcgcattgtatttca
caatggggccatgattttaggccatcatatagagattctattgaaattatacagtctttg
tttccatcgagtaggtacattgctttaacggctacggctacgaacgaagtaaagacagac
atcttaaatttgttaaatattccaccacattgtacaacaactaattctattgagcggcct
aatttaacgcttaaagttaatccaacctatcagcgtcaaaaatttatcgttgactatatt
gaaacgcattcaaaatcgtctggaattatatatgtatcaacgagaaaaaatgttgagtca
ttgtcggaatatttatcttctcaggggatagactgtctagcttatcatggtggtatgagt
aataatgatagaattgagcaacaacgagcctttatgtatgatgaaaaacgtgtcattgtt
gctacaaatgcatttggaatgggaatagataagtcgaatattcgctttattatccattat
aatatgccaggtgatatagaatcatactatcaagaagttggtcgtgcaggtcgtgatggt
caaccaagtgaatgtattttgctatattctgagaaagatatagacttacaacaattcttt
attgaccagtcgaacggaagtgaagattacattcaaaagcaacgtgacaaattgaatgaa
atgattcggtataaaagaacaaagcaatgtttagaagcatttattattcattacttcaat
ccgaatcaacggttaaatgaatgtgggcgatgtagtaattgtaaatctaatgataaaacc
tatgatatgacaatagaggcacaaaaaattgtcagtgcactgtatagaataaaagatgat
attgcatcagagttgtttattcaaatgttacgtggtgaggagaatcaagaaatactgagc
cgtgagttaaacaacattagaacatatggtatactgaaagagtataaaactaaagaagta
aggcatttgttaaatgaattagtttataaaggatatatttatttaactgatgaaggattg
cgatgccatgaaagtataaaatcaattctttttgatggaatgaaagtttacacctatcca
ttcaaagtaaaagtgaaagagatagttgatatttcaacacataaagacattgatcaagtg
ctattggataggctctataatattcgaaaaaaattaagtgctaaacataatgttgcaccg
attatgatatttcaagatcatattattaaagaattttctaagaaaatgccaacgtccaaa
aaagaaatgatgaacatttcaggtattggcaactacaaattaaaacattattgtccattg
tttatcgatgagattaaatcatatttagcccaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (29)   

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