KEGG   Shewanella baltica BA175: Sbal175_0733
Entry
Sbal175_0733      CDS       T02014                                 
Name
(GenBank) 60 kDa chaperonin
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
sbb  Shewanella baltica BA175
Pathway
sbb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sbb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Sbal175_0733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbb03019]
    Sbal175_0733
   03110 Chaperones and folding catalysts [BR:sbb03110]
    Sbal175_0733
   03029 Mitochondrial biogenesis [BR:sbb03029]
    Sbal175_0733
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbb04147]
    Sbal175_0733
Enzymes [BR:sbb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Sbal175_0733
Messenger RNA biogenesis [BR:sbb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Sbal175_0733
Chaperones and folding catalysts [BR:sbb03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Sbal175_0733
Mitochondrial biogenesis [BR:sbb03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Sbal175_0733
Exosome [BR:sbb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Sbal175_0733
  Exosomal proteins of other body fluids (saliva and urine)
   Sbal175_0733
  Exosomal proteins of breast cancer cells
   Sbal175_0733
  Exosomal proteins of colorectal cancer cells
   Sbal175_0733
  Exosomal proteins of bladder cancer cells
   Sbal175_0733
SSDB
Motif
Pfam: Cpn60_TCP1 DUF5891
Other DBs
NCBI-ProteinID: AEG10016
UniProt: G0AXA2
Position
883871..885508
AA seq 545 aa
MAAKEVVFGNDARIRMLAGVNILANAVKVTLGPKGRHVVLDKSFGSPLITKDGVSVAREI
ELTDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKNLSQECVDSKAIAQVATISANSDESIGEIIATAMEKVGKAGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINTPETGCIELDHPFVLLVDKKISNIRELLPILESL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGERRKAMLQDVAILTGGTV
IAEEIGLELEKVTLEELGTAKRVVITKDNTTIIDGNGEQTQIAERISQIKQQIEVATSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVPGGGVALI
RVASKIADVEVLNEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANTVKNGSGNFGYNA
SNDTYGDMLEMGILDPTKVTRCALQFAASIAGMMITTEAMVAEIPQNASQDMGGMGGMGG
MGGMM
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggcagctaaagaagttgtatttggtaacgacgctcgcataagaatgctggctggcgta
aatattctcgcaaatgcagttaaagtgaccttaggccctaaaggccgtcacgtggtacta
gacaagagtttcggttcaccactgatcactaaagacggggtgtcggtagcaagagaaatt
gaactgacagataagttcgaaaacatgggcgcacaaatggtgaaagaagttgcttctaaa
gccaacgacgccgccggtgatggtactactactgcaactgtactggctcaagccattgta
actgaaggcttaaaagccgttgcagccggtatgaatccaatggacctgaagcgcggtatc
gacaaagccgttattgctgccgttgctgagctgaaaaatctatctcaagaatgtgttgat
tcaaaagcgattgcccaagttgccactatctctgcaaactctgacgagtctatcggcgaa
attatcgcgactgcgatggaaaaagtcggtaaggcaggtgtgatcacagttgaagaaggc
caagcactggaaaatgaattggacgtagtagaaggtatgcagtttgaccgtggctacctg
tctccatacttcatcaacacgccagaaaccggctgcatagaattagatcacccattcgta
ctgttagtagacaagaaaatctctaacattcgcgaactgttacctatccttgaaagtctg
gcaaaaaccggtaagccattgcttatcgttgctgaagacgttgaaggcgaagcattagca
accttagttgtgaacaatatgcgcggtattgtgaaagtggctgccgttaaagccccgggc
tttggcgaacgtcgtaaggcaatgctacaagacgtagcaatcctgactggcggtactgtt
attgctgaagaaatcggcctagagcttgaaaaagtaacgctagaggaattaggtacagct
aagcgtgttgtgatcactaaagacaacactaccatcatcgatggtaacggcgagcaaaca
caaattgctgaacgtataagccaaatcaagcaacaaattgaagttgcgacgtcagactac
gacaaagaaaaactgcaagagcgtatggctaaactagctggcggcgtagcagtgattaaa
gttggtgcagcgactgaagttgaaatgaaagagaaaaaagcccgcgttgatgatgctctg
catgcaactcgcgctgcggtagaagaaggcgtggtgcctggcggcggtgttgctctgatt
cgtgtagcctctaagatcgctgacgttgaagtattaaacgaagaccaaaaacacggtgtg
gttatcgcactgcgtgcaatggaagcgccactgcgtcaaatcgccactaacgcgggtgaa
gaagcgtcagttgttgctaacacagtgaagaacggcagcggtaacttcggttataacgct
agtaacgacacttatggtgacatgttagaaatgggtatccttgacccaactaaagtgacc
cgttgtgcattgcaattcgctgcgtcaatcgcaggtatgatgatcactacagaagctatg
gttgctgaaattccacaaaatgctagccaagatatgggcggtatgggtggcatgggcgga
atgggcggcatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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