KEGG   Streptomyces bingchenggensis: SBI_04038
Entry
SBI_04038         CDS       T01678                                 
Name
(GenBank) putative ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sbh  Streptomyces bingchenggensis
Pathway
sbh03420  Nucleotide excision repair
sbh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sbh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SBI_04038
   03430 Mismatch repair
    SBI_04038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbh03400]
    SBI_04038
Enzymes [BR:sbh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SBI_04038
DNA repair and recombination proteins [BR:sbh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SBI_04038
   MMR (mismatch excision repair)
    Other MMR factors
     SBI_04038
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 HRDC UvrD_C_2 AAA_30 DUF6011 TF_Zn_Ribbon Babuvirus_MP
Other DBs
NCBI-ProteinID: ADI07159
UniProt: D7BQD0
Position
complement(5134958..5137249)
AA seq 763 aa
MTAATPSPLFPRVSTPAEYATVPRDADAVLEGLDPEQREVATALYGPVCVLAGAGTGKTR
AITHRIAYGVRAGVFQPASVLAVTFTNRAAGEMRGRLRQLGAGGVQARTFHSAALRQLQY
FWPKAVGGEVPRLLERKVQLVAEAAARCRVRLDRNELRDVTGEIEWSKVTQTVPEDYPAV
AAKSGREAPRDAAEIARIYGMYEQLKRERGVIDFEDVLLLTVGVLQERHDIADQVRRQYQ
HFVVDEYQDVSPLQQRLLELWLGDRESLCVVGDASQTIYSFTGATPDHLLNFRTRHPGAT
VVKLVRDYRSTPQVVHLANGVLAQARGRAADHRLELVSQREPGPDPVYTAYADEPAEAEG
VARRIRELITPVEQGGGGVPASEVAILYRVNAQSEVYEQALADAQVPYQLRGAERFFERP
EVREAGLLLRGAARAGNADPALTDADIPSQVRAVLGTRGWTPEPPAGSGAVRDRWESLAA
LVRLAEQFCASQLAAGRQVTLADLVAELDERAAAQHAPTVEGVTLASLHAAKGLEWDAVF
LVGLTEGMVPITYAKTDPQVEEERRLLYVGVTRARRHLALSWALSRSPGGRANRRPSRFL
NGLRPGSAAPAPRMPGGAGGIERGSGGAIAPVRKRRGPVHCRVCGRTLTDAGEMKLRRCE
DCPSELDEALYERLRDWRAEQAGQLGQPAYCVFTDKTLLAIAEAVPGTEGELSGIPGVGR
RKLDKFGADVLALCSGRELTRAEGIDGTSGSGSEEPARNSTEK
NT seq 2292 nt   +upstreamnt  +downstreamnt
gtgacagcagcaacgccctcccctctcttcccgcgggtctccacgccggccgagtacgcg
acggttccgcgcgacgccgacgcggtgctcgaagggctcgacccggagcagcgcgaggtg
gccacggccctgtacgggccggtgtgtgtgctggccggggccgggacgggcaagacccgt
gccatcacccaccggatcgcctatggggtgcgggcgggcgtcttccagcccgcgagtgtg
ctcgccgtcaccttcaccaaccgcgcggcgggggagatgcgcgggcggctgcggcagctg
ggcgcgggcggggtgcaggcgcgcaccttccactcggccgcgctccgccagctgcagtat
ttctggcccaaggcggtgggcggcgaggtgccgcggctgctcgagcgcaaggtgcagctg
gtcgcggaggccgcggcgcgctgccgggtccggctggaccgcaatgagctgcgggatgtg
acgggggagatcgagtggtcgaaggtcacccagaccgtgcccgaggactatccggccgtg
gccgccaagtccggccgggaggccccgcgtgacgccgccgagatcgcccggatctacggc
atgtacgagcagctcaagcgcgagcgcggggtgatcgacttcgaggatgtgctgctgctg
acggttggggtgctccaggagcggcatgacatcgccgaccaggtgcgccgtcagtaccag
cacttcgtggtcgacgagtaccaggacgtcagcccgctgcagcagcggctgctcgagctg
tggctcggcgaccgggagagcctgtgcgtggtcggcgacgccagccagaccatttactcc
ttcaccggcgccacccccgaccatctgttgaacttccgcacccggcacccgggtgcgacg
gtcgtcaagctggtccgcgactaccgctccaccccccaggtcgtccacttggccaacggg
gtgctggcccaggcccgcggccgggcggcggaccaccgactggagctggtctcacagcgc
gagccgggacccgacccggtctatacggcatacgcggacgagccggccgaggccgagggg
gtggcccgccggatccgtgagctgatcacccccgtggagcagggcggcggcggggtcccg
gcgagcgaggtcgcgatcctctaccgggtcaatgcgcagtcggaggtctatgagcaggcg
ctggccgacgcccaggtgccttatcagctgcgcggcgccgagcggttcttcgagcgacct
gaggtgcgcgaggcggggctgctgctgcgcggcgcggcccgcgcgggaaacgcggacccc
gcgctgacggacgcggatatcccctcccaggtgcgggcggtgctcggtacccgcggctgg
acgccggagcccccggccggatcgggcgcggtccgtgaccgctgggagtccctggcggcg
ctggtgcggctcgccgagcagttctgcgcgagccagttggcggcgggccggcaggtcacg
ctggccgatctggtggcggagctcgacgagcgggcggcggcccagcacgccccgaccgtc
gaaggtgtgacgctcgcctcactgcacgccgccaagggcctggagtgggacgcggtcttt
ctggtcgggctcaccgagggcatggtgcccatcacctatgccaagaccgacccgcaggtg
gaggaggagcgtcggctgctctatgtgggggtcacccgtgcccgccgccatctggccctc
tcctgggcgctctcgcgctctcccggaggccgtgcaaaccgccgccccagccgctttctg
aacgggctgcgtcccggctccgcggcccccgccccccgcatgccgggcggggccggcggc
atcgagcgcggcagtggcggagcaatcgccccggtccgcaagcggcgcggcccggtgcac
tgccgggtgtgcggcaggacgctgacggacgcgggcgagatgaagctgaggcgctgtgag
gactgcccctcggagctggacgaggcgctgtacgagcggctgcgggactggcgggccgag
caggccgggcagctgggccagcccgcctactgcgtcttcaccgacaagaccctgctggcg
attgccgaggccgtaccgggaaccgaaggggagctgtcgggcatccctggagtggggagg
cggaagctcgacaagttcggcgccgacgtcctcgcgctctgctccgggcgggaactcacc
cgggcggaggggatcgacgggaccagcggaagcggttccgaagaacccgcgcgaaactcg
acggaaaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system