KEGG   Streptomyces bingchenggensis: SBI_05388
Entry
SBI_05388         CDS       T01678                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
sbh  Streptomyces bingchenggensis
Brite
KEGG Orthology (KO) [BR:sbh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbh03032]
    SBI_05388 (gyrB)
   03400 DNA repair and recombination proteins [BR:sbh03400]
    SBI_05388 (gyrB)
Enzymes [BR:sbh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SBI_05388 (gyrB)
DNA replication proteins [BR:sbh03032]
 Prokaryotic type
  DNA Topoisomerases
   SBI_05388 (gyrB)
DNA repair and recombination proteins [BR:sbh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SBI_05388 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 GlutR_dimer
Other DBs
NCBI-ProteinID: ADI08508
UniProt: D7C8V7
Position
6609178..6611220
AA seq 680 aa
MLCQKGRFVADSGNPNENIPSEIPSEDVDGALAPPSYDASAITVLEGLDAVRKRPGMYIG
STGERGLHHLVQEVVDNSVDEALAGHADTIEVTILPDGGVRVVDNGRGIPVDLHPVEKKP
AVEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTKVSVEVKRDGYRWTQDYKLGV
PTAPLAKNEQVTETGTTVTFWADPDVFETTEYSFETLSRRFQEMAFLNKGLSISLTDERA
AHVDEEGKPLSVTYCYEGGIVDFVQYLNSRKGELVHPTIIGFEAEDKERMLSVEIAMQWN
TQYTEGVYSFANTIHTHEGGTHEEGFRAALTYLINKYARDKKLLREKDDNLTGEDIREGL
TAIISVKLGEPQFEGQTKTKLGNTEAKTFVQKIVHEHLADWLDRNPNEAADIIRKSIQAA
TARVAARKARDLTRRKGLLETASLPGKLADCQSNDPAKCEIFIVEGDSAGGSAKAGRNPQ
YQAILPIRGKILNVEKARVDKILQNNEVQALISAFGTGVHEDFDISKLRYHKIILMADAD
VDGQHINTLLLTFLFRFMRPLVEAGHVFLSRPPLYKIKWGRDDFEYAYSDRERDALIQAG
REQGKRIKEDSVQRFKGLGEMNAEELRVTTMDVDHRVLGQVTLDDAAQADDLFSVLMGED
VEARRSFIQRNAKDVRFLDI
NT seq 2043 nt   +upstreamnt  +downstreamnt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaacatcccg
tccgagatcccgtccgaggacgtcgacggggctctggccccgccgtcctatgacgccagt
gcgatcaccgtcctggagggcctggacgcggtccgcaagcgacccggtatgtacatcggt
tccaccggtgagcgcggcctccaccaccttgtccaagaggtggtggacaactccgtggac
gaggccctggccggtcacgcggacaccatcgaggtgacgatcctgcccgatggcggggtc
cgcgtggtcgacaacggccgcggtatcccggtcgacctgcatccggtggagaagaagccg
gccgtcgaggtcgtgctgaccgtgctgcacgcgggcggcaagttcggcggcggaggctac
gccgtctccggcggtctgcacggcgtcggcgtctccgtggtcaacgcgctgtcgacgaag
gtctcggtcgaggtcaagcgggacggctaccgctggacccaggactacaagctgggtgtg
cccaccgcgccgctggccaagaacgagcaggtcacggagaccggtacgacggtcaccttc
tgggccgacccggatgtcttcgagacgaccgagtactccttcgagacgctgtcgcggcgc
ttccaggagatggcgttcctcaacaaggggctgtccatctcgctgacggacgagcgcgcg
gcccatgtggacgaggagggcaagccgctctccgtgacgtactgctacgagggcggcatc
gtcgacttcgtgcagtacctgaactcccgcaagggggagctggtccaccccacgatcatc
ggattcgaggccgaggacaaggagcggatgctctcggtcgagatcgcgatgcagtggaac
acccagtacaccgagggtgtctacagcttcgcgaacaccatccacacccatgagggcggc
acccacgaggagggcttccgcgccgcgctgacgtacttgatcaacaagtacgcgcgggac
aagaagctgctccgggaaaaggatgacaatctcactggtgaggacatccgtgagggtctg
accgcgatcatctcggtcaagctgggcgagccgcagttcgagggtcagacgaagaccaag
ctgggcaacacggaggcgaagaccttcgtccagaagatcgtccatgagcacctggccgac
tggctggaccgcaaccccaacgaggcggcggatatcatccgcaagtccatccaggcggcg
acggcccgggtggcggcccgtaaggcccgcgatctgacccgccgcaaggggctgctggag
accgcgtcgctgccgggcaagctggccgactgccagtccaacgaccccgccaagtgcgag
atcttcatcgtcgagggtgactccgccggcggttcggccaaggccggccgcaacccgcag
taccaggcgatcctgcccatccgaggcaagatcctcaacgtcgagaaggcacgggtcgac
aagatcctccagaacaacgaggtccaggcgctgatctcggcgttcggcaccggtgtgcac
gaggacttcgacatcagcaagctccgctatcacaagatcatcctgatggcggacgccgac
gtcgacggccagcacatcaacaccctgctgctcaccttcctcttccgctttatgcgcccg
ctggtcgaggcgggccatgtcttcctgtcccgcccgccgctctacaagatcaagtggggc
cgggacgacttcgagtacgcgtactcggaccgtgagcgggacgcgctgatccaggccggc
cgcgagcagggcaagcgcatcaaggaggactcggtccagcgcttcaagggtctgggcgag
atgaacgccgaggagctgcgcgtgaccaccatggacgtggaccaccgcgtcctgggccag
gtcaccctggacgacgccgcgcaggccgacgatctgttctcggtcctgatgggcgaggac
gtcgaggcccggcgctcgttcatccagcgcaacgccaaggacgtccgcttcctcgacatc
tga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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