KEGG   Sorghum bicolor (sorghum): 8073771
Entry
8073771           CDS       T01086                                 
Name
(RefSeq) eukaryotic initiation factor 4A-10
  KO
K03257  translation initiation factor 4A
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8073771
   03012 Translation factors [BR:sbi03012]
    8073771
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbi04147]
    8073771
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     8073771
   mRNA cycle factors
    Stress granule specific factors
     8073771
Translation factors [BR:sbi03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    8073771
Exosome [BR:sbi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   8073771
  Exosomal proteins of bladder cancer cells
   8073771
SSDB
Motif
Pfam: DEAD Helicase_C TniB
Other DBs
NCBI-GeneID: 8073771
NCBI-ProteinID: XP_021315112
Position
4:8234608..8238218
AA seq 693 aa
MDVDEESLEVGDKEPIRLKTAFRSFDGAPFSYYFTFGWSSKLVMVTAVQDKTEGIQKPKG
IEVSRSNGKAKENKISAPAATITNSEKTATESIVLEEPKGIEESRSNGKAKENISAPTAT
ITNSEKTETESSKPEGAQSIGPSPRSMIGEDHFGDIQKPPIKHVFKRRGKKQQVTEAINK
SPSNKMDKEVAPHSSSNATSSGASIGCDMLDQKDCSKMEPNRELNMEEITPVGKSEKAKK
LGASRDTECNNVAAPTINSKKTQILGDTSRTPRNELITKHTKDILLILVFCAFGGVGMDQ
MGSGVRGHKNMDTRLLPSSEEVVIYDSFSEMGLQENLLKGIYKYGLEKPSAVHQRGIVPL
CKGFGVVHRSLTGTTEIICSGVLQQLDYGSAECQALILVPTPYLAQVTEKVLGALGQFLG
VTAQTCTGGTIAPADQQTLSSRVQVVVGTPDCILDVLQRQALSPDHIRMLFLDEADELLT
GGSKDQIYNIILHLQNKIQVGLFSATYSHEAIQTSCRFIDKPVEVIVPRGEELKNVKQHF
VTVENEELKLGKLYDLFKITGVQRLVIFVNTQDKAVSLAKDVSKHYTVSVSHDGMNQRAS
DTAIQKLMSGSSRVLIATDHQGTNTMPQVPIIINYDLPTKSMQYICRLQQQNKLFRKPLS
VIINLVTPADRCTLATITRFCNSSMGELPSDLK
NT seq 2082 nt   +upstreamnt  +downstreamnt
atggatgtggatgaggaaagtttggaagttggagataaggagcctattaggctaaagacc
gcattcagaagttttgatggtgctcccttctcttactactttacatttggatggtcttca
aaactagtaatggtcacagcagtacaagacaaaacagaaggtatacaaaagccgaagggc
attgaagtgtcaagatcaaatggaaaggctaaagaaaacaaaataagtgctccagcagcc
acaataacaaactctgagaaaacagcaacagaaagtatagtgctggaagagccaaagggc
attgaagagtcaagatcaaatggaaaggctaaagaaaacataagtgctccaacagccaca
ataacaaactctgagaaaacagaaacagaaagttcaaaacctgaaggggcgcaatccatt
ggcccaagtccacgaagcatgattggagaagaccacttcggagatatacaaaagcctcct
atcaaacatgtattcaaaaggagaggtaagaagcagcaagttactgaagcaataaacaag
agcccatcaaacaaaatggataaagaagtggctccacatagcagcagtaatgccacaagt
tctggagcctcaattggatgtgatatgctggatcaaaaagattgttcaaaaatggaaccc
aatagggaactgaacatggaagaaataactccagtagggaaaagtgaaaaggccaaaaag
cttggggcaagcagagatactgagtgcaataatgtagctgcccctacaatcaactcgaag
aagacacaaatattaggagacacatcaagaactccgagaaatgagttgatcactaaacac
accaaagatattttgttgatacttgttttttgtgcctttggaggtgttgggatggatcaa
atgggatctggtgttcgaggtcacaaaaatatggacacacggctacttccaagttccgag
gaagttgttatctatgacagtttcagtgagatgggtcttcaggagaatctactcaaggga
atatataaatatggtctggagaagccttcggcagtccatcagagaggaattgtcccatta
tgcaagggctttggtgtggtccatcgatctttgactggaacaactgagataatttgctct
ggtgtactgcagcaacttgattatggatctgcagaatgccaggctttgatccttgtacca
acaccttacttagcacaagtgactgagaaagttcttggagcacttggtcagttccttggt
gttacagcacaaacttgtacaggaggaactattgcccctgcagaccagcaaactctgtca
agtagagttcaggttgtcgttggcacccctgattgcattcttgacgtgctgcaaaggcaa
gcattgtctccagaccacattagaatgctttttttggatgaagcagatgaactgctcact
ggaggttccaaggatcagatctataatattatcctgcatctccaaaacaaaattcaggtt
ggactcttctctgctacctattcccatgaagctatacagactagctgcagattcatcgat
aagcctgtggaggtcattgtcccaagaggtgaagagctaaagaatgtcaagcagcacttt
gtgacggttgagaatgaagaattgaagctaggaaaactatatgatcttttcaagatcaca
ggggtccaacgacttgtcatctttgtgaacacacaagataaggccgtgtccctcgcaaaa
gatgttagcaagcattacacggtctcggtaagccatgatggcatgaatcagcgtgccagt
gacacggccatccagaagttgatgtctgggtcatccagagttctcatagccactgaccat
caaggcactaatacaatgccacaggttcccattattatcaactatgatcttccaacaaaa
tctatgcaatacatctgtcgtcttcagcagcaaaataaactgttcaggaagccactaagt
gtgatcattaatttggtaactcctgctgatcgatgcaccctcgctaccatcacgagattt
tgcaatagctccatgggggagctaccctccgacctgaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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