KEGG   Sorghum bicolor (sorghum): 8077194
Entry
8077194           CDS       T01086                                 
Name
(RefSeq) proliferating cell nuclear antigen isoform X1
  KO
K04802  proliferating cell nuclear antigen
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03030  DNA replication
sbi03410  Base excision repair
sbi03420  Nucleotide excision repair
sbi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    8077194
   03410 Base excision repair
    8077194
   03420 Nucleotide excision repair
    8077194
   03430 Mismatch repair
    8077194
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbi03032]
    8077194
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8077194
DNA replication proteins [BR:sbi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    8077194
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     8077194
   MMR (mismatch excision repair)
    Other MMR factors
     8077194
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    8077194
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9
Other DBs
NCBI-GeneID: 8077194
NCBI-ProteinID: XP_002451636
UniProt: A0A1Z5RLY5
Position
4:4762480..4764600
AA seq 280 aa
MLELRLVQAASLKNVLEALSVLDLSSEVNFEFSGTGFELQAMDTSGAALVALLLRADAFN
HYLCDRDLSMGLNLADMANVFRCANNDDILTIKVDGCPDTVMFVFESPKVGEISYFDLHF
VDINRMPCEIPEIPESEYQAIVRMPSAKFMRICKKLSSVGDREDRDTVASISVDKERVDF
FTSGKAGTSTIFCTVGKPKEPTLIEEPTLIEMKEKVSLSFDLRYVNSFSKMCTQSDQQVT
ISLSPELPVLFEYKITEMGRIRYYVAPRIKLQNEVDGMQN
NT seq 843 nt   +upstreamnt  +downstreamnt
atgttggagctgcggctggtgcaggcggcctccctcaagaatgtcctggaggcgctcagc
gtcctcgacctgtccagtgaggtcaacttcgaattctccggcacgggctttgagctccag
gccatggacaccagcggcgccgcgctcgtcgcgctcctcctccgtgccgatgccttcaat
cactacctctgcgaccgcgacctctccatgggcctgaacctcgccgacatggccaatgtt
ttccgctgcgccaacaacgacgacatcctcaccatcaaggtggatggctgccccgacacc
gttatgttcgtgttcgagtcgcccaaggttggtgagatttcgtattttgatttgcatttc
gtggacatcaaccgcatgccctgcgaaatcccggaaatcccggaatccgagtaccaggcc
atagtccgcatgccctctgccaagtttatgcgtatctgcaagaagctcagcagcgtcggg
gacagagaggacagggacactgttgccagtatctcagtggataaggagcgtgtcgacttc
ttcacttcgggaaaagctgggacctcaacaattttttgcactgttggcaagccaaaagaa
cctacccttatagaagaacctacccttatagagatgaaagaaaaggtttccctgagcttt
gacctaaggtacgtgaactccttctccaagatgtgtacccagtctgatcaacaagtgact
atcagtctttcacccgagctacccgtgctgttcgagtacaagatcacagagatgggccgc
atcagatattacgtggcgccaaggatcaaattgcagaatgaggtagatgggatgcagaac
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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