KEGG   Sorghum bicolor (sorghum): 8077419
Entry
8077419           CDS       T01086                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1
Organism
sbi  Sorghum bicolor (sorghum)
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3
Other DBs
NCBI-GeneID: 8077419
NCBI-ProteinID: XP_021312031
Position
3:complement(73878903..73886733)
AA seq 1577 aa
MEDDDPAAAGLTVPEAFIRRVKLSVTSNQEIKLMAHPVEDPIPITHCSQLQDNPSLGLPL
QDGSTCESCGATQLDKCDGHFGFIKLPEPIYHPSHIAELGKILNLVCLRCLRLKKPKKVT
GKESRFTSCSYCQELSPLCVSQVKKSNGARSLELKLPLKQEVADGFWSFLDQFGFHTSGT
SHRRPLHPKEVQDIMKKITEKTRARLAARGYNLQDGFVMDNMSIPPNCLQISNMLDENTE
MCPPDTSKGLLHKVLRTIEQIESLNISHPNIEARELGADDLQVAVADYMNMGGAAKVSQH
VTFTRQPAPKQWHKKMKTLFLSKSSSYTCRAVITGDPYIGLDVVGVPDEIARRMSVQECV
TNYNIARLQDMMNKGLCLTYTDLNTNTYDLDGKKGNKKCIMLRVGETVDRRVLDGDLVFL
NKPPSTDMHSIQALYVHVHDDHTIKINPLICGPLEADFDGDCVHIFFPRSVLARVEAAEL
FAVEKQLLNSHNAKLNFQIKNDYLLALRIMCDRSYSKEKANQIAMFSSGMIPPCNPWTIC
DRWTIPQILQTTDALRIVPSHPNTVGASVTAIITSTLSEKGPREAIKLINLLQPLLMESL
LMDGFSISLKDLDGQSAMQKANQSISLEIDKFSKSIVDFIANSSALGLLVDPKNDSALMN
LVEQVGFLGYQLQSTDRLYSNNLVEDCYNFLEKRSGSTKCYDPPKGHDFVTSSFYNGLNP
YEELLHSISVREKIERSSSKGLAEAGNLFKNMMAMLRDVTVCYDGTMRTSYNNSIVQFDS
TNVSSSLTPGDSIGILAATVFANAAYKAVLVPNQKNMTSWDSMKEVLLTNACSKTGTIDQ
KAILYLNKCFCGLKFCSELAAHRVQSCLKRIKLEYCAIEVSIKYQQEATQAAQCLVGHIH
LDKEQLNWMEITMGNILQTCQKNVNKHVMKNRQLMQILKTTEIISSEYCLCGQDIGDERA
LQVSCLQCFIHASTTTVQPESNVIQMMTNTIFPILLDTVIKGDPQVQEAKLIWVEPKLTR
WVKNSSAEQKGELAVEITVEKIAAAENGGTWGVVMDACVPVMDLIDTTRSAPCNIQEVQK
VFGISSVFDRVVQHLSKAVGMVTKSVLMEHLITVASSMTCTGSLHGFNRSGSKATFQSLK
VQAPFTEATLSRPMQCFRKSAEKVDSDQLDSVVSTCSWGNHAAIGTGSAFKIHWNDENQS
ASNEILREYNLYDFLEAVGRIGATEQKTDAPHSLCLYDVGQLPEDEVQEDEVVCFGGTSP
ISWTDKPKGDSLLHDFMGRAGMWSTVQKHQEMQNKTKWNSVANWKNDKPMGPPRTAFAES
TSTRGQNKRQFTGQVYARKQPKHSWSQAATHQNNKLSWCGENVAGAQDFANAESSKGGWN
RKNSGFGRGGHRGGGRGMAFANAESSSSGGWNRKNSGFGRGGRRGGGRGMWKSEGSHRGG
SNSTNWRAQNNNSARQCGISYSFTPVEQQIYTQVEPIIKNVKRIIRESRDGMKLSQDDEM
FIMNKILMYHPEKEKKMAGQGNYIMVNKHQTFPSSRCLYVASSDGSSSDFSYKKCLENFI
RIHYPHAAESFCRKYFK
NT seq 4734 nt   +upstreamnt  +downstreamnt
atggaggacgacgatccggcagctgctggcctgaccgtcccagaggccttcatccgccgg
gtcaaactcagcgtcacaagcaaccaggagatcaagctcatggcacatccggtggaggat
cccatcccgatcacgcactgcagccagctccaggacaacccatcgctggggctgcccctg
caggacggcagcacatgcgagtcctgcggcgccacacagctcgacaaatgcgatgggcat
tttggcttcatcaagctgccggagcccatctaccaccccagccacatcgccgagctgggg
aagatactcaaccttgtctgcctccgctgcctccgcctcaagaaacccaagaaggttacc
gggaaagaaagcagattcacctcatgttcatactgtcaggaactctcaccactatgtgtc
agtcaagtaaagaaatccaacggtgcccgtagcttggaactgaaactgccattaaagcaa
gaggttgccgatgggttttggagcttccttgatcaatttggcttccacacaagcggtaca
tctcaccgccgccccttacacccaaaagaggttcaggacataatgaagaagatcactgaa
aaaacaagagctaggcttgctgctaggggatacaatcttcaggatggatttgtgatggat
aacatgtccatcccacccaattgcctgcagatttcaaatatgttagatgagaacacagaa
atgtgccctcctgatacatcaaaaggcttgttgcataaagttctacgcacgatagaacaa
atcgaaagcttaaatatcagccacccaaatattgaagcacgtgagttaggggcagatgat
cttcaggtagctgtcgccgattacatgaatatgggaggggcagcaaaggtttcccagcat
gtcacctttacaagacagcctgcaccaaaacagtggcataaaaagatgaagaccctcttc
cttagtaagagttcaagctacacgtgccgtgcagtgatcactggtgacccatacattggc
cttgatgtagtaggggtgcctgatgaaatagcgagaagaatgtcagtacaagaatgtgtc
acaaactacaacattgctcggctgcaagacatgatgaataaaggactatgcctgacatac
actgatctgaataccaacacatatgacttggatgggaagaaaggaaacaagaagtgcatc
atgctaagggttggtgaaactgtagaccgaagagtccttgacggggacctcgtctttctc
aataaaccaccaagcactgacatgcactcaattcaagccttatatgtccatgtccatgat
gaccacactataaagatcaacccactcatctgtggccctcttgaagcagattttgatggt
gattgtgttcacatcttctttccaagatcagttctagcaagggttgaagctgcagagctc
ttcgctgtggagaaacaactgctgaattcccacaatgccaagctgaactttcaaatcaag
aatgactacctactagctctgaggataatgtgtgacagatcgtattctaaagaaaaggca
aaccaaattgccatgttctcgtcagggatgattccaccgtgcaatccttggactatttgc
gatcgctggactattcctcagattctacagactactgatgcattaagaatcgtaccaagc
cacccgaacactgttggagcctcagttactgccatcatcacatcaactctttcagaaaag
ggtccaagagaggccataaagctcataaatcttctgcagcccctcctaatggaatcactg
cttatggatggtttcagcataagcttgaaagatcttgatggccagagtgcaatgcaaaag
gcaaatcaaagtatttctcttgagatcgataagttcagcaagtcaattgtggacttcatt
gctaattcatctgcccttggtctgctcgttgatccaaaaaatgattcagctctgatgaat
ttagttgagcaggttggtttcttaggctatcaattgcaaagcactgataggttatactct
aacaacttagtggaggactgctataactttctagaaaagcgcagtggaagcaccaagtgt
tatgatccaccaaagggacatgattttgttacgagttcattttacaatggtttaaaccca
tatgaggaactactccactcaatatcagtaagggaaaagatagaacgctcatcatctaaa
ggactggctgaagcaggcaatctttttaagaacatgatggcaatgctccgagatgtcaca
gtatgctacgatggaaccatgagaacttcgtacaataactcaattgtacaatttgattcg
acaaatgtatcaagttctctgacaccaggtgattctattggtatcttagcagccactgta
tttgcaaatgctgcatacaaggcagtgttagttccaaatcagaaaaacatgacatcttgg
gactcaatgaaggaagtacttcttaccaatgcttgctctaaaactggtaccattgaccaa
aaggcaattttgtatctgaacaaatgcttttgtggactcaagttttgttcggaactagca
gcacacagggtgcaatcctgcttaaaaagaatcaaattggagtattgtgccattgaggtt
tccatcaagtaccagcaagaagcaactcaagcagcacaatgccttgttggtcacattcac
ctagataaggagcaattgaattggatggaaataactatgggaaatattcttcaaacatgc
caaaaaaatgtcaataaacatgtaatgaaaaataggcagctgatgcaaattttgaagaca
actgaaataatttcaagtgaatattgcttgtgtggccaggatataggtgatgagcgagcc
ttgcaagtttcctgcttgcagtgtttcatccatgcaagcaccaccacagtgcaacctgaa
tctaatgttatccagatgatgaccaataccattttccctatactcttggacacggttata
aaaggtgatcctcaagtccaggaagctaagttgatatgggttgaaccaaaattaacacgt
tgggtcaagaactccagtgcagagcaaaaaggagagctggcagtggaaatcacagtggaa
aagatagcggctgcagagaacggtggcacctggggagtagtaatggatgcatgtgtccct
gtgatggatcttattgacaccaccaggtctgcaccttgcaatatccaagaagttcaaaag
gtgtttggcatttccagcgtctttgatcgagtcgtgcagcacctttccaaggctgttggg
atggttacaaaatcagttctcatggagcacctgataaccgtggcaagcagcatgacctgc
acaggtagcttgcatggcttcaacagatctggttccaaggccacattccagtccctgaag
gttcaagcgccatttactgaagctacactgtctagaccaatgcaatgtttccggaagagt
gcagagaaggtagactctgatcagctggatagtgttgtgtcaacctgctcttggggtaat
catgcagcaatcgggactggctcagctttcaaaatccactggaatgatgagaaccagtct
gcaagcaacgaaatactcagagagtacaatttatatgacttccttgaagccgttggaaga
ataggagctactgaacagaagacagatgctcctcacagtttatgcttgtatgacgttggc
cagcttccagaggatgaagttcaagaggatgaggtggtatgttttggtggaactagtcca
atatcatggacagacaagccaaaaggtgattccctgctgcatgattttatgggtagggct
ggaatgtggagcactgtacagaaacaccaggaaatgcaaaataagacaaaatggaactca
gttgcaaactggaaaaatgataagccaatgggtcctccccgtacagcttttgcagaatca
actagcaccagaggacagaacaagagacagtttactggccaagtatacgctcgaaagcaa
ccaaagcatagctggagccaagctgcgacacaccaaaataacaagctaagttggtgtgga
gaaaatgttgcaggcgcacaggactttgccaatgcagaatcatctaaaggtggatggaac
aggaagaatagtggttttggtcgaggtggtcatagaggtggcggtagaggcatggccttt
gccaatgcagaatcatctagctcaggtggatggaacaggaagaatagtggttttggtcga
ggtggtcgtagaggtggcggtagaggcatgtggaaatcagagggatcacaccgtggaggc
agtaacagcacgaactggagagcccagaataacaacagtgctagacaatgtgggatcagt
tatagtttcacaccagtggagcagcagatatacacacaagtcgaaccaatcattaagaat
gtaaagaggatcatccgtgaatcaagagatggtatgaagctttctcaggatgatgagatg
ttcatcatgaacaagattctgatgtaccacccagagaaggagaagaagatggccggtcag
ggcaactacattatggtcaataagcatcaaactttccctagcagcaggtgcttgtacgtt
gcatcctcagatggatcgagttcagatttctcttacaagaagtgcctagagaatttcatc
aggattcactacccacatgctgcggaatcgttctgcagaaagtacttcaaatga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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