KEGG   Sorghum bicolor (sorghum): 8080424
Entry
8080424           CDS       T01086                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 9
  KO
K03133  transcription initiation factor TFIID subunit 9B
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    8080424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8080424
   03036 Chromosome and associated proteins [BR:sbi03036]
    8080424
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     8080424
   Coactivators
    SAGA/TFTC/STAGA complex
     8080424
Chromosome and associated proteins [BR:sbi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     8080424
    STAGA complex
     8080424
    TFTC complex
     8080424
    SAGA complex
     8080424
    SLIK complex
     8080424
SSDB
Motif
Pfam: TFIID-31kDa CENP-S DUF5877 CENP-T_C LonB_AAA-LID Bromo_TP
Other DBs
NCBI-GeneID: 8080424
NCBI-ProteinID: XP_002467704
UniProt: A0A921S3L3 C5WWP0
Position
1:complement(62869995..62876244)
AA seq 228 aa
MDAGGARPSAPSAAAAAGTAVAGASAADEPRDARVVRELLRSMGLGEGEYEPRVVHQFLD
LAYRYVGDVLGDAQVYADHAGKAQIDADDVSLAIQAKVNFSFSQPPPREVLLELARSRNR
IPLPKSIAPPGSIPLPPEQDTLLAQNYQLLPPLKPPPQYEETEDENEESNPSLTPNPANS
NPTFSQDQRNNEQQHTPQHGQRVSFQLNAVAAAAAKRPRMTIDQLNMG
NT seq 687 nt   +upstreamnt  +downstreamnt
atggacgccggcggcgcacgtccatcggcaccgtcggccgccgctgccgcaggcaccgca
gttgcgggggcctccgcggcggacgagccccgggacgcgcgggtggtgcgggagctcctg
cgctcgatgggtctcggcgagggcgagtacgagccccgcgtcgtgcaccagttcctcgac
ctggcataccggtacgtcggagacgtgctcggggacgcccaggtctacgccgaccacgcc
gggaaggctcagatcgacgccgacgacgtcagcctcgccatccaggccaaggtcaatttc
tccttctcccagccgccgccgcgcgaggttctccttgagctggcccgtagccgaaacaga
attccactgcccaaatcaattgctcctccaggctcaattcccctcccacctgagcaggac
acactgttggcccagaactaccaactcctacctccattgaagccaccacctcaatatgag
gaaacagaggatgagaatgaagaatccaacccaagtctgacaccgaacccagcaaattct
aatccaaccttctcgcaggatcagagaaataacgagcaacagcacactccccaacatggt
cagagggtttcattccaactcaatgctgtggcagctgctgctgcaaagcgtcctcggatg
accattgatcagctgaacatgggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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