KEGG   Sorghum bicolor (sorghum): 8080914
Entry
8080914           CDS       T01086                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
  KO
K10589  ubiquitin-protein ligase E3 C [EC:2.3.2.26]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    8080914
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbi04121]
    8080914
Enzymes [BR:sbi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     8080914
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  HECT type E3
   8080914
SSDB
Motif
Pfam: HECT IQ
Other DBs
NCBI-GeneID: 8080914
NCBI-ProteinID: XP_002439333
UniProt: C5Z0M5 A0A921Q8I1
Position
9:5453744..5468534
AA seq 1026 aa
MFFSGDPSSRRRVDLGGRSNKERDRKVLLEQTREERRRRQGLRLQNTSATKIQKFFRGKK
ALESARSEVRKNFCSTFGEHCERIEWNNFGTNSDFLRQLLFFFNANEDNDIAILCQVCNL
LLQYVKQGGDVVTLFTGVDGSSLQPLVAHRVKKFALICVQAVYQKRHDWGRQLLATPGST
SVPVSLLETVGCLINPKFPWNCKVVGYLQQRKIYSLFRGIIVSVPHKVRNSGHFDSASVL
EQVLMLVASHVGHHPCCCLKVDPRWSFSSQLLSIPFLWHRLPHLKKVFSVNGLSKYYIHQ
IACFLPSLADVLPNDISASHPGYACVLANVLEAATWILSDAKFASDSAADIIAVSTSLLD
TLPAVTTPTERADDDDEMPMDVDVKINLDVDLERQITVAIDSKLLQHLVNALFRGTLSTN
DSDLSGPSDAEVDAVGSICAFLHVTFNTFPLERIMTVLAYRTEIVPALWNFIKRCNANRR
WPFFSKFASSLPADVPGWLLPMSVFCPIYRHMLKIIDNGEFYEQEKPLSLKDLKSLVLIL
KQALWQLLWVIPSSSPQKVSPNPSGLKKLSVENVKTRARVGLSELLTQLQDWNNRLPFTS
ASDFYSQEATSENFVSQAILGNTRASEIIKLTPFLAPFTSRVKIFNNQLTSSRQSTSHSA
LTRQRFKIRRNRLLEDAFDQLSLLSEEDLKGPIRVSFINEHGEEEAGIDGGGIFKDFMEN
ITRAAFDVQYGLFKETADHLLYPNPGSGLVHELHLQYFHFLGSLLGKAMYEGILVDLPFA
TFFLSKLKQKYNFLNDLPSLDPELYRHLLFLKHYNGDISELELYFVIVNNEYGEQCEEEL
LPGGREMRVTNDNVITFIHLVANHRLNYQIRAQSTHFLRGFQQLIPKDWIDMFNEHEIQV
LISGSLESLDIDDLRSNTNYSAGYHPDHELIEMFWEVLKSLSSDNQKKFLKFVTGCSRGP
LLGFQYLEPKFCIQRAGVPGLEEHADRLPTSATCMNLLKLPPYKSKEQMQTKLLYAINSE
AGFDLS
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgttcttctcgggtgacccgtcgtcgcggcggcgggtcgacctcggcgggcggagcaac
aaggagcgggaccgcaaggtgctgctggagcagacgcgcgaggagcggcgccggcgccag
ggcctccgcctccagaacacctccgccacgaagatccagaaattcttcagagggaagaag
gctttggaatcggcccgctcagaggttcggaagaatttttgctccacttttggggaacat
tgcgagaggatagagtggaacaactttggcactaattctgactttcttcgacaattactg
tttttcttcaatgcaaatgaagacaatgacatagctatactttgccaagtctgcaacttg
ctgctgcaatatgttaaacaaggcggagatgttgtaactctctttactggtgtggatggc
tcctcactgcaacctcttgttgctcacagagtaaaaaaatttgccctcatctgtgtgcaa
gcagtctatcaaaagaggcatgattggggcaggcaacttttggctacacctggaagcaca
tcagtgcctgtctcattactggaaactgtaggttgcttgataaatccaaaatttccttgg
aactgcaaagtagttggttatcttcagcagagaaagatctatagcttattccgtggcatt
atcgtatctgtaccgcataaagtcagaaattctgggcattttgatagtgcatctgtgctg
gagcaagttctcatgcttgttgcttcacatgttggccatcatccctgttgttgtctgaaa
gtggatccaagatggagtttctcgtctcagcttctgtcaatcccttttctatggcatcgc
ttaccacacctcaagaaggttttctcagttaacgggctcagcaaatattatatccatcaa
atagcttgctttttgcccagtcttgctgatgtccttccaaacgatatatcggctagtcat
ccaggatatgcgtgtgtccttgcaaatgttcttgaagctgcaacctggattttgtctgat
gcaaagtttgcttctgattcagcggctgacatcattgctgtttctacctcgttgttggat
acgttgccagcagtcacaacaccaactgaaagggcagatgacgatgatgagatgcccatg
gatgtcgatgttaaaattaatcttgatgttgatttggaaagacagataactgtagcaatt
gattcaaagctccttcaacatttggtgaatgccctcttcagaggtacattaagcacaaat
gattctgatctgtctggaccatcagatgctgaagtggatgctgtaggatctatttgtgct
tttcttcatgtcacattcaatacattccctctagagcgaattatgactgtactggcctac
cggactgaaattgttcctgcactatggaacttcataaagcggtgcaatgcaaaccgaaga
tggccatttttttctaagtttgcatcttcattacctgctgatgttcctggttggctcctt
cccatgtctgtattctgtcccatatacaggcacatgttgaagataattgataatggggag
ttctatgaacaggagaaacccctttcccttaaagatttgaagtccttggttctcatttta
aagcaggcgttatggcaacttctttgggttattccatcctcttctcctcagaaagtgtca
cccaacccttcaggccttaaaaagttgtcagtggagaatgtcaagaccagagctagggtt
gggttatctgaactactcacacagttgcaagattggaacaaccgactcccatttacttct
gcaagtgatttctattctcaagaagcaacaagcgaaaattttgtgtctcaggcgatactt
ggtaatactcgagcatcagagatcataaagcttactccttttttggctccatttaccagt
cgagtcaaaatattcaataaccaattaacgagctctagacaatcaacatcacattctgca
ttgacaagacaacggttcaaaataagaagaaatcgacttctggaagatgcttttgatcag
ctaagtttgctttctgaggaagatctcaaaggaccgattcgagtttcgtttattaatgag
catggtgaagaagaggctggaatcgatggtggtggaattttcaaggatttcatggaaaat
attactcgcgctgcttttgatgtgcagtacggtctcttcaaggagacggctgatcatctt
ttgtacccaaacccaggatctggattggttcatgaactacatctgcaatatttccatttt
cttggaagtctacttgggaaggcaatgtatgaaggcatacttgttgatttgccatttgca
acgttcttcttgagcaagttgaaacaaaagtacaattttttaaatgatcttccttcattg
gatccggaattgtaccgtcatcttctatttttaaagcattacaatggtgatatctcagag
ttggaactatactttgttattgtaaataatgaatatggtgaacaatgtgaagaagaactt
ctccctggtgggagggaaatgcgtgttacgaatgataatgttattacttttatccatctt
gtcgccaatcatcggttaaactaccagatccgtgcacaaagtacacacttcttgagaggt
tttcaacagcttataccaaaagactggattgatatgttcaatgaacatgaaattcaggtt
cttatatctggctctttagaaagcttggatatcgatgacttgcggtcgaacaccaactat
tctgcaggatatcatccggatcatgagcttattgagatgttttgggaggtcttgaagagc
ttaagttcagacaaccagaaaaaatttctcaagtttgtgaccggatgttctcgtggtccc
ctcctcggatttcagtacctcgaaccaaaattttgcattcagagagctggtgttccagga
ctggaggagcatgcagatcgcttgcctacatcagctacctgcatgaaccttctgaagctt
cccccttataaaagcaaggagcagatgcaaaccaaactgttgtacgcgataaattcagaa
gctggttttgatctaagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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