KEGG   Shigella boydii Sb227 (serotype 4): SBO_0868
Entry
SBO_0868          CDS       T00301                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6 dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
sbo  Shigella boydii Sb227 (serotype 4)
Pathway
sbo00521  Streptomycin biosynthesis
sbo00523  Polyketide sugar unit biosynthesis
sbo00525  Acarbose and validamycin biosynthesis
sbo00541  O-Antigen nucleotide sugar biosynthesis
sbo01100  Metabolic pathways
sbo01110  Biosynthesis of secondary metabolites
sbo01250  Biosynthesis of nucleotide sugars
Module
sbo_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:sbo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    SBO_0868 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    SBO_0868 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    SBO_0868 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    SBO_0868 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    SBO_0868 (rfbB)
Enzymes [BR:sbo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     SBO_0868 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD RmlD_sub_bind NAD_binding_4 adh_short KR
Other DBs
NCBI-ProteinID: ABB65538
ShiBASE_China: SBO0868
UniProt: Q323H0
Position
complement(882583..883668)
AA seq 361 aa
MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC
DAAVMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS
DKKNSFRLHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA
WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA
RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYIADRPGH
DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKWVDNVKSGAYQSWIEENYEGR
Q
NT seq 1086 nt   +upstreamnt  +downstreamnt
gtgaaaatacttgttactggtggcgcaggatttattggttctgctgtagttcgtcacatt
ataaataatacgcaggatagtgttgttaatgtcgataaattaacgtacgccggaaacctg
gaatcacttgctgatgtttctgattctgaacgctatgtttttgaacatgcggatatttgc
gatgcagctgtaatggcacggatttttgctcagcatcagccggatgcagtgatgcacttg
gctgctgaaagccatgttgaccgttcaattacaggccctgcggcatttattgaaaccaat
attgttggtacttatgtccttttggaagccgctcgcaattactggtctgctcttgatagc
gacaagaaaaatagcttccgtcttcatcatatttctactgacgaagtctatggtgatttg
cctcatccagatgaagtaaataatacagaagaattacccttatttactgagacgacagct
tacgcgccaagcagtccttattccgcatccaaagcatccagcgatcatttagtccgcgcg
tggaaacgtacctatggtttaccgaccattgtgactaattgctctaacaattatggtcct
tatcatttcccggaaaaattgattccattggttattctcaatgctctggaaggtaaagca
ttacctatttatggtaaaggggatcaaattcgcgactggctgtatgttgaagatcatgcg
cgtgcgttatataccgtcgtaaccgaaggtaaagcgggtgaaacttataacattggtggg
cacaacgaaaagaaaaacatagatgtagtgctcactatttgtgatttgctggatgagatt
gtaccgaaagagaaatcttatcgtgagcaaatcacttatattgccgatcgtccgggacac
gatcgccgttatgcgattgatgctgagaagattggtcgcgaattgggatggaaaccacag
gaaacgtttgagagcgggattcggaagacagtggaatggtacctgtccaatacaaaatgg
gttgataatgtgaaaagtggtgcctatcaatcgtggattgaagagaactatgagggccgc
cagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system