KEGG   Shigella boydii Sb227 (serotype 4): SBO_2554
Entry
SBO_2554          CDS       T00301                                 
Symbol
yfhO
Name
(GenBank) putative aminotransferase
  KO
K04487  cysteine desulfurase [EC:2.8.1.7]
Organism
sbo  Shigella boydii Sb227 (serotype 4)
Pathway
sbo00730  Thiamine metabolism
sbo01100  Metabolic pathways
sbo01240  Biosynthesis of cofactors
sbo04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:sbo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    SBO_2554 (yfhO)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    SBO_2554 (yfhO)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sbo03016]
    SBO_2554 (yfhO)
   03029 Mitochondrial biogenesis [BR:sbo03029]
    SBO_2554 (yfhO)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sbo02048]
    SBO_2554 (yfhO)
Enzymes [BR:sbo01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     SBO_2554 (yfhO)
Transfer RNA biogenesis [BR:sbo03016]
 Eukaryotic type
  tRNA modification factors
   Thiolation factors
    SBO_2554 (yfhO)
 Prokaryotic type
    SBO_2554 (yfhO)
Mitochondrial biogenesis [BR:sbo03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    SBO_2554 (yfhO)
Prokaryotic defense system [BR:sbo02048]
 DNA phosphothiolation system
  Sulfur modification proteins
   SBO_2554 (yfhO)
SSDB
Motif
Pfam: Aminotran_5 Cys_Met_Meta_PP Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: ABB67098
ShiBASE_China: SBO2554
UniProt: Q31XW0
Position
complement(2555707..2556945)
AA seq 412 aa
MMYGVYRAMKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVD
IARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCR
QLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRA
RGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHG
GGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGD
LEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSS
IRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQGVDLNSIEWAHH
NT seq 1239 nt   +upstreamnt  +downstreamnt
gtgatgtacggagtttatagagcaatgaaattaccgatttatctcgactactccgcaacc
acgccggtggacccgcgtgttgccgagaaaatgatgcagttcatgacgatggacggaacc
tttggtaacccggcctctcgttctcaccgtttcggctggcaggctgaagaagcggtagat
atcgcccgtaatcagattgccgatctggtcggcgctgatccgcgtgaaatcgtctttacc
tctggtgcaaccgaatctgacaacctggcgatcaaaggtgcagccaacttttatcagaaa
aaaggcaagcacatcatcactagcaaaaccgaacacaaagcggtactggatacctgccgt
cagctggagcgcgaaggttttgaagtcacctacctggcaccgcagcgtaacggcattatc
gacctgaaagaacttgaagcagcgatgcgtgacgacaccatccttgtttccatcatgcac
gtaaataacgaaatcggcgtggtgcaggatatcgcggctatcggcgaaatgtgccgtgct
cgtggcattatctatcacgttgatgcaacccagagcgtgggcaaactgcctatcgacctg
agccagttgaaagttgacctgatgtctttctccggtcacaaaatctatggcccgaaaggt
atcggtgcgctgtatgtacgtcgtaaaccgcgcgtacgcatcgaagcgcaaatgcacggc
ggcggtcacgagcgcggtatgcgttccggcactctgcctgttcaccagatcgtcggaatg
ggcgaggcctatcgcatcgcaaaagaagagatggcgaccgagatggaacgtctgcgcggc
ctgcgtaaccgtctgtggaacggcatcaaagatatcgaagaagtttacctgaacggtgac
ctggaacacggtgcgccgaacattctcaacgtcagcttcaactacgttgaaggtgagtcg
ctgattatggcgctgaaagacctcgcagtttcttcaggttccgcctgtacgtcagcaagc
ctcgaaccgtcctacgtgctgcgcgcgctggggctgaacgacgagctggcacatagctct
atccgtttctctttaggtcgttttactactgaagaagagatcgactacaccatcgagtta
gttcgtaaatccatcggtcgtctgcgtgacctttctccgctgtgggaaatgtacaagcag
ggcgtggatctgaacagcatcgaatgggctcatcattaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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