KEGG T00301: SBO

Shigella boydii Sb227 (serotype 4): SBO_4329

Entry

SBO_4329          CDS       T00301

Symbol

yjdH

Name

(GenBank) putative 2-component sensor protein

K07701

two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]

Organism

sbo Shigella boydii Sb227 (serotype 4)

Pathway

sbo02020

Two-component system

Brite

KEGG Orthology (KO) [BR:sbo00001]
09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SBO_4329 (yjdH)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sbo01001]
    SBO_4329 (yjdH)
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sbo02022]
    SBO_4329 (yjdH)
Enzymes [BR:sbo01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.13  Protein-histidine kinases
    2.7.13.3  histidine kinase
     SBO_4329 (yjdH)
Protein kinases [BR:sbo01001]
Histidine kinases
  CitB family [OT]
   SBO_4329 (yjdH)
Two-component system [BR:sbo02022]
CitB family
  DcuS-DcuR (C4-dicarboxylate metabolism)
   SBO_4329 (yjdH)

SSDB

Motif

Pfam:

HATPase_c sCache_3_2 PAS HATPase_c_5 PAS_10 SPOB_a dCache_1 HATPase_c_2 PAS_8 PAS_9 sCache_3_3 PAS_4 PDZ PAS_7 HATPase_c_3

Other DBs

NCBI-ProteinID:

ABB68745

ShiBASE_China:

SBO4329

UniProt:

Q31T63

Position

complement(4380083..4381714)

AA seq 543 aa
MRHSLPYRMLLKRPMKLSTTVILMVSAVQFSVLLVVHLIYFSQISDMTRDGLANKALAVA
RTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTDMQSLRYSHPEAQRIGQPF
KGDDILKALNGKENVAINRGFLAQALRVFTPIYDENHKQIGVVVSGLELSRVTQQINDSR
WSIIWSVLFGMLVGLIGTCILVKVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDD
RGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRL
LLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRLDGLVNYADALRERSHEFMNKLHVILG
LLHLKSYKQLEDYSLKTANNYKEEIGSLLGKIKSPVIAGFLISKINRATDLGHTLILNSE
SLLPDSGSEDQVATLITTLGNLIENALEALGPEPGGEISVTLHYRHGWLHCEVNDDGPGI
APDKIDHIFDKGVSTKGSERGVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIPWDGER
SNR

NT seq 1632 nt +upstreamnt +downstreamnt
atgagacattcattgccctaccgcatgttactcaaacgtccgatgaaattgagtaccaca
gtgatcttaatggtcagcgcggtacagttctcggtgctattggtggtgcatctgatttac
ttctcgcaaatcagtgatatgacacgagacgggctggccaacaaggcactggcagtggcg
cgtaccctcgccgactcgccggaaatccgtcagggcttgcagaaaaaaccgcaggagagc
ggaatccaggccatcgcggaagccgtgcgcaaacgcaacgatctgctgtttattgtcgtt
acggatatgcaaagtcttcgctactcgcatcctgaagcccagcgtattggtcagccattt
aaaggtgatgacatccttaaagcgctgaatggcaaagaaaatgtcgctatcaatcgcggt
tttctggcgcaggctttacgcgtatttacccccatctacgatgaaaatcataaacaaatt
ggcgtggtggtgagcggccttgagttaagccgcgtgacccaacaaatcaatgacagtcgc
tggagcattatctggtcggtattatttggcatgctggtcggactgattggcacctgcatt
ctggttaaggtactgaaaaaaatccttttcggcctggaaccctacgaaatctccacgctg
tttgagcagcgccaggccatgttgcagtctatcaaagaaggcgtcgttgccgtggacgat
cgcggcgaggtcacgctgatcaacgatgccgcacaagaattgctgaattaccgtaagtcg
caggacgatgagaaactgtcgacgctaagccactcatggtcacaggtggtagatgtctcg
gaagtgttacgcgacggtacgccgcgccgcgacgaagagattacgattaaagaccggcta
ttactgatcaacaccgttccggtgcgcagtaatggcgttatcatcggtgccatttcaacc
ttcagggacaaaactgaagttcgtaaactgatgcagcgactcgacggtctggtcaactat
gctgatgcacttcgtgaacgatcccacgaatttatgaataaattgcatgtgattctcgga
ttattgcatctgaagagttataagcagttggaagattacagtctcaaaacagccaataac
tataaggaagagattggctctctgctgggtaagatcaaatctccggttatcgctggtttt
ttaatcagcaagattaaccgcgcgaccgatttaggccatacgctgattttaaacagtgaa
agcctgctgccagacagcggcagtgaggaccaggtcgcgacgctgattaccacattggga
aatctgatagaaaacgcgctggaagcattagggccggaacccggtggcgaaattagcgta
acattgcactaccgtcacggctggctgcactgcgaagttaacgatgatggaccggggatc
gcacccgacaaaatcgatcacatttttgacaaaggtgtctcgacaaaaggaagcgagcga
ggcgtcggtttagcacttgtcaaacaacaggtagaaaatctcggcggcagcatcgccgtg
gaatcggaacccgggattttcacacaattttttgtccagataccctgggacggggagagg
tcaaacagatga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (27)   

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