KEGG   Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101051510
Entry
101051510         CDS       T04350                                 
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
  KO
K06236  collagen type I alpha
Organism
sbq  Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04151  PI3K-Akt signaling pathway
sbq04510  Focal adhesion
sbq04512  ECM-receptor interaction
sbq04611  Platelet activation
sbq04820  Cytoskeleton in muscle cells
sbq04926  Relaxin signaling pathway
sbq04933  AGE-RAGE signaling pathway in diabetic complications
sbq04974  Protein digestion and absorption
sbq05146  Amoebiasis
sbq05165  Human papillomavirus infection
sbq05205  Proteoglycans in cancer
sbq05415  Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:sbq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    101051510 (COL1A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101051510 (COL1A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101051510 (COL1A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101051510 (COL1A1)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    101051510 (COL1A1)
  09152 Endocrine system
   04926 Relaxin signaling pathway
    101051510 (COL1A1)
  09154 Digestive system
   04974 Protein digestion and absorption
    101051510 (COL1A1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    101051510 (COL1A1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    101051510 (COL1A1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    101051510 (COL1A1)
  09166 Cardiovascular disease
   05415 Diabetic cardiomyopathy
    101051510 (COL1A1)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    101051510 (COL1A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sbq00536]
    101051510 (COL1A1)
Glycosaminoglycan binding proteins [BR:sbq00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101051510 (COL1A1)
SSDB
Motif
Pfam: Collagen COLFI VWC
Other DBs
NCBI-GeneID: 101051510
NCBI-ProteinID: XP_003931313
UniProt: A0A2K6S139
Position
Unknown
AA seq 1464 aa
MFSFVDLRLLLLLAAAALLTHGQEEGQVEGQDEDIPPITCVQNGLRYHDRDVWKPEPCRI
CVCDNGKVLCDDVICDETKNCPGAEIPEGECCPVCPDGSEATTDQETTGVEGPKGDTGPR
GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGP
MGPSGPRGLPGPPGSPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGR
PGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQ
MGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPAGFPGAVGAKGEAGPQGP
RGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP
QGPSGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGL
PGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGL
TGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV
PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGE
QGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGS
QGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGD
KGETGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGP
PGPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGP
AGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGV
VGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGA
EGSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGP
VGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGP
RGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSF
LPQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCR
DLKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPNVAQKNWYISKNPKD
KRHVWFGESMTDGFQFEYGSEGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQ
TGNLKKALLLQGSNEIEIRAEGNSRFTYSVTVDGCTSHTGAWGKTVIEYKTTKTSRLPII
DVAPLDIGAPDQEFGFDVGPACFL
NT seq 4395 nt   +upstreamnt  +downstreamnt
atgttcagctttgtggacctccggctcctgctcctcttagcggccgccgccctcctgacg
cacggccaagaggaaggccaagtcgagggccaagacgaagacatcccacccatcacctgc
gtacagaacggcctcaggtaccatgaccgagacgtgtggaaacccgagccctgccggatc
tgcgtctgcgacaacggcaaggtgttgtgtgatgacgtgatctgtgatgagaccaagaac
tgccccggtgccgaaatccccgagggcgagtgctgtcccgtctgccccgacggctcagag
gccaccaccgaccaagaaaccaccggcgtcgagggccccaagggagacactggcccccga
ggcccaaggggacccgcaggcccccctggccgagatggcatccccggacagcctggactt
cccggaccccccggaccccccggacctcccggaccccctggcctcggaggaaactttgct
ccccagctgtcctatggctatgatgagaaatcaacaggaggaatttccgtgcctggcccc
atgggtccttctggtcctcgtggtctccctggcccccctggttcacctggtccccaaggc
ttccaaggtccccctggtgagcctggtgagcctggagcttcaggtcccatgggtcctcga
ggtccccctggcccccctggaaagaacggagatgatggggaagctggaaaacctggtcgt
cctggtgagcgtgggcctcctgggcctcagggtgctcgaggattgcccggaacagctggc
ctccctggaatgaagggacacagaggcttcagtggtttggatggtgccaaaggagatgct
ggtcctgctggtcccaagggtgagcctggcagccctggtgaaaatggagctcctggtcag
atgggtccccgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggt
gctcgtggaaatgatggtgctactggtgctgccggcccccctggtcccactggccccgct
ggtcctgctggcttccctggtgctgttggtgctaagggtgaagctggtccccaagggccc
cgaggctctgaaggtccccagggtgtgcgtggtgagcctggcccccctggccctgctggt
gctgctggccctgctggaaaccctggtgctgacggacagcctggtgctaaaggtgccaat
ggcgctcctggtattgctggtgctcctggcttccctggtgcccgaggcccctctggaccc
cagggccccagcggccctcctggtcccaagggtaacagcggtgaacctggtgctcccggc
agcaagggagacactggtgccaaaggagaacccggccctgttggtgttcaaggaccccct
ggccctgctggagaggaaggaaagcgaggagcccgaggtgaacccggacccactggcctg
cccggaccccctggcgagcgcggtggacctggtagccgtggattccctggcgccgatggt
gttgctggtcccaagggtcccgctggtgaacgtggttctcctggccctgctggccccaaa
ggatctcctggtgaagctggtcgtcccggtgaagctggcctgcctggtgccaagggtctg
actggaagccctggcagccccggtcctgatggcaaaactggcccccctggtcccgctggt
caagatggtcgccccggacccccaggcccccctggtgcccgtggtcaggctggtgtgatg
ggatttcctggacctaaaggtgctgctggagagcccggcaaggctggagagcgaggtgtt
cctggaccccctggcgctgtcggtcctgctggcaaagatggagaggctggagctcaggga
ccccctggccctgctggtcccgctggcgagagaggtgaacaaggccctgctggctccccc
ggattccagggtctccctggacctgctggtcctcccggtgaagcaggcaaacctggtgaa
cagggtgttcctggagaccttggtgcccccggcccctctggagcaagaggcgagagaggc
ttccctggcgagcgtggtgtgcaaggtccccctggtcctgctggtccccgtggggccaac
ggtgctcccggcaacgatggtgctaagggtgatgctggtgctcctggagcccccggtagc
cagggcgcccctggccttcagggaatgcctggtgaacgtggtgcagctggccttccaggg
cctaagggtgacagaggtgatgctggtcccaaaggtgctgatggctctcctggcaaagat
ggcgtccgtggtctaactggccccattggtcctcctggccctgctggtgcccctggtgac
aagggtgaaactggtcccagcggccctgctggtcccactggagctcgtggtgcccccgga
gaccgtggtgagcctggtccccccggccctgctggcttcgctggcccccctggtgctgac
ggccaacccggtgctaaaggcgaacctggagatgctggtgctaaaggcgatgctggtccc
cctggccctgccggacccgctggcccccctggccccattggtaacgttggtgctcctgga
cccaaaggtgctcgcggcagcgctggtccccctggtgctactggtttccctggtgctgct
ggccgagtcggtccccctggcccctctggaaatgctggaccccctggccctcctggtcct
gctggcaaagaaggcggcaaaggtccccgtggtgagactggccctgctggacgtcctggt
gaagttggcccccctggcccccctggccctgctggcgagaaaggatcccctggtgctgat
ggacctgctggtgctcctggtactcctggacctcaaggtattgctggacagcgtggtgtg
gtcggcctgcctggtcagagaggagaaagaggcttccctggtcttcctggcccctctggt
gaacctggcaaacaaggtccctctggagcaagtggtgaacgtggtccccctggtcccatg
ggcccccctggattggctggaccccctggtgaatctggacgtgagggagctcctggcgct
gaaggttcccctggacgtgatggctctcctggccccaagggtgaccgtggtgagaccggc
cccgctggaccccctggtgctcctggtgctcctggtgcccctggccccgttggccctgct
ggcaagagtggtgaccgtggtgagactggtcccgctggtcctgccggtcctgttggccct
gttggcgcccgtggccctgctggaccccaaggcccccgtggtgacaagggcgagactggc
gaacagggtgacagaggcataaagggtcaccgtggcttctctggcctccagggtccccct
ggccctcccggctctcctggtgaacaaggtccctctggagcctctggtcctgctggtccc
cgaggtccccctggctctgccggtgctcctggcaaagatggactcaacggtcttccaggc
cccatcgggcctcccggtcctcgtggtcgcactggtgatgctggtcctgttggtccccct
ggccctcctggccctcctggtccccctggtcctcccagcggtggtttcgacttcagcttc
ctgccccagccacctcaagagaaggctcacgatggtggccgctactaccgggctgatgat
gccaatgtggttcgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccag
cagatcgagaacatccggagccccgagggcagccgcaaaaaccccgcccgcacctgccgc
gacctcaagatgtgccactctgactggaagagcggagagtactggattgaccccaaccaa
ggctgcaacctggatgccatcaaggtcttctgcaacatggagactggtgagacctgcgtg
taccccactcagcccaacgtagcccagaagaactggtacatcagcaagaaccccaaggac
aagaggcacgtctggtttggcgagagcatgacggacggattccagtttgagtatggcagc
gagggctccgaccctgccgatgtggccatccagctgaccttcctgcgcctgatgtccacc
gaggcctcccagaacatcacctaccactgcaagaacagcgtggcctacatggaccagcag
actggcaacctcaagaaggctctgctcctccagggctccaacgagatagagatccgcgcc
gagggcaacagccgcttcacctacagcgtcaccgttgatggctgcacgagtcacaccgga
gcctggggcaagacagtgatcgaatacaaaaccaccaagacctcccgcctgcccatcatc
gatgtggcccccttggacattggtgccccagaccaggaattcggctttgacgttggccct
gcctgcttcctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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