KEGG   Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101052947
Entry
101052947         CDS       T04350                                 
Symbol
COL5A3
Name
(RefSeq) collagen alpha-3(V) chain
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
sbq  Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04820  Cytoskeleton in muscle cells
sbq04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:sbq00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101052947 (COL5A3)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    101052947 (COL5A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sbq00536]
    101052947 (COL5A3)
Glycosaminoglycan binding proteins [BR:sbq00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101052947 (COL5A3)
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_3
Other DBs
NCBI-GeneID: 101052947
NCBI-ProteinID: XP_003939060
Position
Unknown
AA seq 1608 aa
MGWGRNNPAPGAGLHPSRPISAQHSFPTSPVQLSAAPLQQAPPGRALERRARPGRGLRQQ
FPADPERSGRREGLHRARGVSAPRCRPVRSPALPVGSAGMGNRRGLGQLQLLPGTQADPV
DVLKAMGVRGGQAGVPEGPGFCPQRTPEGDRAFRVGQANTLGIPTWELFPDGHFPENFSL
LITLRGQPANQSVLLSIYDETGARQLGLALGPALDLLGGPFRPLPQQVNLTDGRWHRVAV
SIDGGVVTLVADCEAQPPVLGHGPRFISIAGFTMLGTQDLEEKTFEGDIQELLISPDPQA
AFQACERYLPGCDSLVPAATEAPQGEPETPRPRRKGKGKGRKKGRGRKGKGRKKKKEILT
SSPPPDSLENQGAGQKGAKGEPAVIEQGQQFEGPPGAPGPRGVVGPSGPPGPPGFPGDPG
LPGPAGLPGIPGVDGIRGPPGTVIMMPGLPGHPGLKGEAGVAGPQGPRGLQGPHGPPGRV
GKMGRPGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGERGSE
GPPGPTGQAGEPGIPGPQGLIGTPGEKGPPGNPGIPGLPGADGPPGHPGHEGPTGEKGAQ
GPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDVGLKGDRGKPGAPGPR
GEDGPEGPKGQEGLAGEQGPPGSAGEKGKLGVPGLPGYPGRPGSKGKAGQPGLEGERGPP
GSRGERGQPGATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGKDGRP
GHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGSPGPPGPPGEQGLPGMEGRE
GAKGELGPPGPLGKEGPTGPRGFPGPKGAPGDPGSTGLKGDKGPPGPVGANGSPGERGPL
GPAGGIGLPGQSGNQGPIGPAGEKGSPGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEE
GDKGDVGAPGHKGIKGDKGDAGPPGPAGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDD
GVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPSGSEGLPGLPGGV
GQPGAVGEKGEPGEAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGPPGEDGAK
GNMGPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPS
GHMGREGREGEKGAKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGIPGPVGEPGLLGSP
GRMGPPGPLGPSGLPGLKGDAGPKGEKGHIGLIGLIGPSGEAGEKGDQGLPGVQGPPGPK
GDPGPPGPIGSLGHPGPPGMVGPLGQKGSKGSPGSMGPRGDTGPAGPPGPPGPPAELHGL
HRRRRRSVPVPLPFVEGGLEEVLASLTSLSLELEQLQRPPGTAERPGLVCHELHRNHPHL
PDGEYWIDPNQGCARDSFRVFCNFTAGGETCLYPDKKFEIFSYVDADGSPVNVVQLNFLK
LLSATARQSFTYSCQNAAAWLDQATGDHSRSARFLGTNGEELSFNQTTAATVSIPQDGCR
LRKGQTKTIFEFSSSRAGFLPLWDVAATDFGQTNQKFGFELGPVCFSS
NT seq 4827 nt   +upstreamnt  +downstreamnt
atggggtggggcaggaacaacccagctcctggcgctgggctccaccccagccggccaatc
agcgctcagcacagtttcccaacttccccggtccagctgtcagcggcccccctccaacaa
gctccgcccggccgggctctggagcgcagggcgaggccggggcggggtctccgacagcag
tttccagcggaccccgaaaggagcggccgccgcgagggactgcaccgagcccgaggagtc
tctgcgcctcgctgccgccccgtccggtcccccgccctgcccgtgggctccgccgggatg
gggaaccgccggggcctgggccagctgcagcttctgcccgggacgcaggccgatcctgtg
gatgtgctgaaggccatgggtgtgcggggaggccaggctggggtccctgaggggcctggc
ttctgtcctcagaggactccagagggtgaccgggcattcagagtgggccaggccaacaca
ctcggcatccccacgtgggaactctttccagatggccactttcctgagaacttctccctg
ctgatcaccttgcggggccagccagctaatcagtctgtcctgctgtccatttatgatgaa
acgggtgcccggcagttgggcctggcactggggccagccctggatctcctaggtggcccc
ttccgccccctcccccagcaggtcaacctcacagatggcaggtggcaccgtgtggcggtc
agcatagatggtggggtggtgacccttgttgctgactgtgaagctcagccccctgtcttg
ggccatggcccccgattcatcagcatagctggattcactatgctggggacccaggacctt
gaggagaagacttttgagggagacattcaggagctgctgataagtccagatcctcaggct
gccttccaggcttgtgagcggtacctccccggctgtgacagcctggtgccggcagccaca
gaggctccccagggcgaaccagaaacccctcgtcctcggcggaagggtaagggaaaaggg
aggaagaaagggcgaggccgcaaggggaagggcaggaaaaagaagaaggaaattttgacc
tcaagtccacctcctgactccctggagaaccagggtgctggacagaaaggagcaaaagga
gagccggcagtgattgaacagggacagcagtttgagggacctccaggagccccaggaccc
cgaggggtggttggcccctcaggccctcctggccccccaggattccctggggaccctggt
ctaccgggccctgctggcctcccaggaatccccggcgttgacgggatccggggcccaccg
ggcacagtgatcatgatgccgggtctccctggacatccaggtctaaaaggagaggcggga
gtggcagggccacagggtccccgaggcctacagggacctcatggaccccctggccgagtg
ggcaagatgggccgccctggagcagacggggctcggggcctcccaggggacactggacct
aagggtgatcgtggcttcgatggcctcccagggctgcctggtgagaagggccaaaggggt
gactttggccatgtggggcaacctggtcccccaggagaggatggtgagaggggatcagag
ggacctccagggcccactggccaggctggggagccgggaatccccggaccccagggactc
atcggcactcctggggagaagggtccccctggaaacccaggaattccaggcctcccagga
gctgatggccctccgggtcacccaggccatgagggccccacgggagagaaaggggcccag
ggtccaccagggtcggcaggccctccaggttatcctggacctcgaggagtgaagggcact
tcagggaaccggggcctccagggggagaaaggcgagaagggcgaggacggcttcccaggc
ttcaagggtgatgtggggctcaaaggtgaccgggggaagcctggagccccaggtccccgg
ggagaggatggtcccgaggggccaaaggggcaggaggggctggctggtgagcaggggccc
ccaggctcagctggggagaagggcaagcttggggtgccaggcctcccaggttatccagga
cgtcctggatctaagggaaaggctggacagccagggctggaaggagagcggggaccgcca
ggctcccgtggagagagggggcaaccaggtgccacagggcaaccaggccccaagggcgat
gtgggccaggacggggcccctggaatccctggagaaaagggcctccctggtctgcaaggc
cctccaggattccccgggccaaagggcccccctggtcaccaaggtaaagatggacgacca
gggcaccctggacagagaggagagttgggcttccaaggtcagacaggcccacctggacca
gctggtgtcttgggccctcagggaaagacgggagaagtgggccctctgggtgaaaggggg
tctccgggcccccctggacctcctggggaacaaggtcttcctggcatggaaggcagagag
ggagccaagggggagctgggaccaccgggaccccttggaaaggaagggccaactggaccc
aggggctttcccggccccaagggggcccctggggacccgggatctactggtttgaagggt
gacaagggacccccagggcccgtcggggccaatggctcccctggtgagcggggtcctctg
ggcccagcaggaggcattggacttcctggccaaagtggcaaccaaggccccattgggcct
gcaggcgagaaggggtccccaggagaacgtggccctcctggccccactggcaaagatggg
atcccagggcccctagggcctctgggaccccctggagctgctgggccttctggcgaggaa
ggggacaagggggacgtgggcgcccctggtcacaaggggatcaaaggcgataaaggagat
gcgggcccacctggaccagcagggatacggggtcctgcaggacacccaggtcccccagga
gcagatggggctcaggggcgccggggacccccaggcctctttgggcagaaaggagatgat
ggagtcagaggctttgtgggggtgattggccctcctggattgcaggggctaccaggccct
cctggagagaaaggggaggttggagacgttgggtccatgggtccccacggagctccaggt
cctcggggtccccaaggccccagtggatcagagggccttccagggctgcctggaggagtt
ggtcagccaggtgccgtgggtgagaagggggagccaggggaggctggagacccagggcct
ccaggagccccgggcatcccggggcccaaaggagacattggtgaaaagggggactcaggc
ccatctggagctgctggacccccaggcaagaaaggtccccctggagaggatggagccaaa
gggaacatgggccccacagggctccctggagatctagggcccccaggagaccctggagtt
tcaggcatagacggttccccaggggagaagggagaccctggtgacgttggggggccgggc
ccgcctggagcttctggggaacccggcgcccctgggccccccggcaagaggggtccttca
ggccacatgggtcgagaaggcagagaaggggagaaaggtgccaagggagagccaggtcct
gatgggcccccagggaggacaggtccaatgggggctcgagggcctcctggacgtgtgggg
cccgaaggtcttcgagggatccctggccctgtgggtgaaccaggcctcctgggatcccct
ggacggatgggccctcccggccccctggggccctctggcctcccagggctgaagggagat
gctggccccaagggggaaaagggccacattggattgatcggtctcattggcccctcgggg
gaagctggagagaaaggagaccaggggttgccaggtgtgcagggacctcctggccccaag
ggagaccctggtccccctggtcccattggctctctgggccaccctgggcccccaggcatg
gtgggccctctgggacagaaaggctcaaaggggtctccaggttccatgggcccccgtgga
gacaccggacctgcaggccctccaggtcccccgggtccccctgccgagctgcacgggctg
cacaggcgccgccggcgctcggtcccggtcccgctcccattcgtggagggcggcctggag
gaggtgctggcctcgctcacgtcgctgagcttggaactggagcagctgcagcgtcctccc
ggcaccgcggagcgcccgggcctcgtgtgccacgagctgcaccgcaaccacccgcacctg
cctgatggggagtactggattgaccccaaccagggctgcgcgcgggactccttcagggtt
ttttgcaacttcacggcgggaggagagacctgcctttatcccgacaagaagtttgagatc
ttctcctacgtggacgccgatgggtccccagtgaatgtcgtgcagctaaacttcctgaaa
ctgctgagtgccacagctcgccagagcttcacctactcctgccagaatgcggctgcctgg
ctggaccaagccacaggtgaccacagccgctccgcccgcttccttggcaccaatggagag
gagctgtccttcaaccagacgacagcagccaccgtcagcatcccccaggacggctgccgg
ctccggaaagggcagacaaagaccattttcgaattcagctcttctcgagcgggatttctg
cccctgtgggatgtggcggccactgactttggccagacgaaccagaagtttgggtttgaa
ctgggccctgtctgctttagcagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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