KEGG   Fretibacterium fastidiosum: SY1_08980
Entry
SY1_08980         CDS       T02602                                 
Name
(GenBank) ABC-type oligopeptide transport system, periplasmic component
  KO
K15580  oligopeptide transport system substrate-binding protein
Organism
sbr  Fretibacterium fastidiosum
Pathway
sbr01501  beta-Lactam resistance
sbr02010  ABC transporters
sbr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sbr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    SY1_08980
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SY1_08980
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    SY1_08980
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sbr02000]
    SY1_08980
Transporters [BR:sbr02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Oligopeptide transporter
    SY1_08980
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: CBL28179
UniProt: D4M8I4
Position
complement(998337..999938)
AA seq 533 aa
MKGKKWLLALVAVLCLMGTAWAGEREIVYNLGIEPRTIDPVLNSAVDGSTVLYNISEGLV
RIGLDDAPEPGCAESWEVSEDGLSWTFHLREGLKWSDGKPLTAEDFRCGFQRVFNPENAC
PFAYVGYFIKNGEECFKGTAKLEELGVTAVDERTLRLDLKHPSPLMLDYLSYHIFFPARA
DVVEQDPRGWSASGSFPCNGPFMITEWKHNSELTVVKNPHYWDADKVKLDKVRMVMINDV
NTALAAFKGGKVDYNTLVPAPMLPQLLESGEAKARNTLGTYFYVFNTARRPFDDARVRRA
FALAVDRTAIVEKVTRGGQKPANGFIPYGIPGVDPNDPAADFRAEDKAEYLPPRADVEQA
KKLLAEAGYPDGKDFPKVQCKYNSNLGNKAIAEALQAMWRQNLGVEVELYNEEWKVFINT
RNKKDFDIARHGYLVDFFDAGSLLEMWQTGVWENSASFSDAEYDALIRDSLEQMDRAKRI
EDMHKAEQILMREMPVCPLYFYTTPSMQSARVKGIYHSPRNWVFFRGAEVVEP
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgaagggaaagaagtggcttcttgcgctggtggccgtactgtgcctgatggggacggcg
tgggccggggagagggagatcgtctacaacctgggtatcgagccgcggacgatcgacccc
gtgctgaacagcgcagtggatggctccacggtgctctataacatcagcgaaggtctggtg
cgcatcggccttgacgacgcgccggagccggggtgcgccgagagctgggaggtctcagag
gacggcctgtcctggacgttccacctgcgggagggcctgaagtggtctgacggcaagccg
ctgacggcggaggacttccgttgcggcttccagcgcgtgttcaacccggagaacgcctgc
cccttcgcctacgtcggctacttcatcaagaacggcgaggagtgcttcaagggcacggcg
aagctggaggagctgggcgtgacggcggttgacgagaggacgctgcgcctggacctgaag
caccccagccccctgatgctggactacctgtcctaccacatcttcttccccgcgcgggct
gacgtggtggagcaggacccccgtggctggtccgcgtcgggctccttcccctgcaacggg
cccttcatgatcacggaatggaagcacaacagcgagctcacggtggtgaagaacccccac
tactgggatgccgacaaggtgaagctggacaaggtccgcatggtcatgatcaacgacgtc
aacacggccctggcggccttcaagggggggaaggtggactacaacacccttgtccctgct
ccaatgctcccgcagctcctggagagcggcgaggccaaggcgcgaaacacgctgggcacg
tacttttacgttttcaacacggcccgcaggccctttgacgacgcgcgcgtgcgcagggcg
tttgctctggccgtcgaccgcacggccatcgtcgagaaggtgacgaggggtggacagaag
ccggccaacggctttattccctacggcatcccgggcgtggaccccaatgacccggcggcg
gacttccgcgctgaggacaaggcagagtacctccccccgcgcgccgacgtggagcaggcg
aagaagctcctggccgaggcgggctatccggacggaaaggacttccccaaggtgcagtgc
aagtacaacagcaacctcgggaacaaagccatcgcggaagcgcttcaggccatgtggagg
cagaacctgggcgttgaggtggaactctataacgaggagtggaaggtgttcatcaacacc
cgtaataagaaggacttcgacatcgcgcgccacggctacctggtggacttcttcgacgcg
ggcagcctcctggagatgtggcagacgggcgtttgggagaattctgccagcttcagcgac
gcggagtatgacgccctgatccgggattcccttgagcagatggaccgcgcgaagcgcatt
gaggacatgcacaaggccgagcagatcctgatgcgcgagatgccggtctgcccgctttac
ttctacacgacgccctccatgcagagcgcccgggtgaagggaatctatcactctccgcgc
aactgggtgttcttccgcggcgctgaggtcgtggagccgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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