KEGG   Salmonella bongori N268-08: A464_3974
Entry
A464_3974         CDS       T02733                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
sbz  Salmonella bongori N268-08
Pathway
sbz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sbz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A464_3974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbz03019]
    A464_3974
Enzymes [BR:sbz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     A464_3974
Messenger RNA biogenesis [BR:sbz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A464_3974
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: AGR61158
UniProt: S5N2D0
Position
complement(3967969..3969234)
AA seq 421 aa
MSKTHLTEQKFSDFALHPQVIEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIESYIGHSIPVSKYNPEALMTDLPKPLRLTRSRPGNGPRRAGAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcaccctcaggtg
attgaagcccttgaaaagaaagggttttataattgtacgcccattcaggcactggccctt
ccgctaacgctggcgggtcgtgacgttgcagggcaggcgcaaaccggtaccgggaaaacg
atggcgtttctgacgtctacgtttcattatttactctctcatcctgcgatcgatgatcgc
aaggtgaaccaaccgcgcgcactgatcatggcgccgacacgtgagttagccgtacaaatt
cacgccgacgcggaaccattggcgcaagcgacaggattaaaattaggcctggcttacggt
ggcgatggctatgacaagcagctcaaagtcctggaaagcggcgtcgatattcttatcggt
acaacgggccgactgatcgactacgccaaacaaaatcacattaacctcggcgccattcag
gtcgtcgtacttgatgaagccgatcgcatgtacgatctgggctttattaaagacattcgt
tggctattccgccgtatgccgcctgcgaatcagcgtctgaacatgttgttctccgctacg
ctgtcttaccgggttcgcgagctggcgtttgaacaaatgaataacgccgaatatgttgaa
gtggagccggagcaaaagacgggccaccgcattaaagaagagctgttctatccttctaat
gaagaaaaaatgcgtttactgcaaacgctaatcgaagaagaatggccggatcgcgccatt
attttcgccaacacaaagcaccgttgcgaagatatttggggacatctggcggcagacggc
catcgtgttggtttgctaaccggcgacgtcgcgcagaaaaagcgcctgcggattctggat
gaattcacccgcggcgatttagacattcttgtggcgactgatgtcgcggcgcgcgggctg
catattcccgccgtaacacatgtctttaactacgatttgccggacgattgtgaagactac
gttcaccgtatcggccgtactggccgcgcaggcgctagcggacactctattagcctggcc
tgcgaagagtatgcgctgaatttacccgcgattgagagctatatcggccactcgattccg
gtcagcaaatataatccagaggcgctcatgacggatttgcctaaaccgctgcgcctgacg
cgctcgcgccccggcaatggaccgcgccgcgcaggcgctccgcgtaatcgtcgtcgttca
ggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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