KEGG   Staphylococcus carnosus subsp. carnosus: SCA_1233
Entry
SCA_1233          CDS       T00863                                 
Name
(GenBank) putative (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
sca  Staphylococcus carnosus subsp. carnosus
Pathway
sca04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:sca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    SCA_1233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sca03016]
    SCA_1233
Enzymes [BR:sca01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     SCA_1233
Transfer RNA biogenesis [BR:sca03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    SCA_1233
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_C tRNA_Me_trans_M NAD_synthase ThiI QueC ATP_bind_3 Arginosuc_synth Asn_synthase Cofac_haem_bdg
Other DBs
NCBI-ProteinID: CAL28140
UniProt: B9DNH6
Position
complement(1242765..1243877)
AA seq 370 aa
MSNQDTRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYNDVIA
VCNQIGIPYYAVNFEQEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHAMKLGA
DYVATGHYAQVRRDADGNVEMLRGVDNNKDQTYFLNQLTHEQLSKVMFPLGGMEKSEVRR
IAAEQDLATAKKKDSTGICFIGERNFKEFLSNYLPAQSGDMRTLNGKKMGTHSGLMYYTI
GQRHGLGIGGDGDPWFVVGKNLEDNVLYVEQGFHHDALYSDYLIASDVSLVNDIDLTDGL
ECTAKFRYRQKDTKVTVTRIDENQIRVDFDQPVRAITPGQAVVLYDGDVCLGGATIDDVY
KEAGQLTYIV
NT seq 1113 nt   +upstreamnt  +downstreamnt
ttgagcaaccaagatacaagagttgtagtcggtatgtctggcggcgttgacagttcagtc
acagcctacttgctgaaagaacaaggatacgatgttatcggtatcttcatgaaaaactgg
gatgatactgatgaaaatggtgtttgtactgcaactgaagattacaatgatgtaatagca
gtttgtaaccaaatcggcattccatattatgccgtcaactttgaacaagaatactgggat
aaagtatttacttatttcctagatgaatataaaaaaggccgcacaccgaatcctgatgtg
atgtgtaataaagaaattaaattcaaagcatttttagatcacgccatgaaattaggtgct
gattatgttgcaacaggtcattatgcacaagtaagacgtgatgcagatggtaacgtagaa
atgcttcgcggtgtcgataacaataaagatcaaacgtatttcttaaatcaattgacacat
gaacaattatcaaaagtcatgttcccattaggcggaatggaaaaatctgaagtacgtcgc
atcgcagctgaacaagatttagcaacagctaagaaaaaagattctacaggtatctgcttt
attggcgaacgtaatttcaaagaatttttatctaactatttaccagcgcaatcaggcgat
atgcgtacattgaacggtaaaaaaatgggcactcatagcggattaatgtattatacaatt
ggtcaacgtcatggtttaggtatcggcggagatggagacccatggtttgttgtaggtaaa
aacttggaagataatgttttgtatgtcgaacaaggattccatcacgatgcattatatagt
gattacttaatcgcatcagatgtttcgcttgtaaacgatatcgatttaacagatggatta
gaatgtactgcgaaattcagatatcgtcaaaaagatacaaaagtgacagtcactcgtatt
gatgaaaaccaaatccgtgttgattttgatcaaccagtacgtgctatcacaccaggtcaa
gcagtagtattgtatgacggagatgtatgtcttggcggtgcgacaatcgatgatgtatat
aaagaagcaggacaattaacatatattgtttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (29)   

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