KEGG   Struthio camelus australis (South African ostrich): 104149766
Entry
104149766         CDS       T08512                                 
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
scam  Struthio camelus australis (South African ostrich)
Pathway
scam03420  Nucleotide excision repair
scam03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:scam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    104149766 (ERCC4)
   03460 Fanconi anemia pathway
    104149766 (ERCC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scam03032]
    104149766 (ERCC4)
   03400 DNA repair and recombination proteins [BR:scam03400]
    104149766 (ERCC4)
DNA replication proteins [BR:scam03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    104149766 (ERCC4)
DNA repair and recombination proteins [BR:scam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     104149766 (ERCC4)
SSDB
Motif
Pfam: ERCC4 HHH_5 DUF4110
Other DBs
NCBI-GeneID: 104149766
NCBI-ProteinID: XP_009681888
Ensembl: ENSSCUG00000016020
Position
Unknown
AA seq 858 aa
MVFGTKYLVQQLEYFIDQLRSDGVVHLPRRVTNEITNNIRYEFYTQGGVLFATSRILVVD
FLTDRIPANLITGILVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCH
VERVMRNLFVRKLYLWPRFHIAVNSFLEKHKPEVVEIHVSMTPGMLAIQTSILDILNACL
RELKRYNPALEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQY
LTQYDCVTFLNLLESLKASEKAFGENSGWLFLDSSTSMFINARARVYRVADDRMTKKTKV
SENHDVKKENELKRELVLESNPKWEALREVLKEIENENKNSEDLGGPGQVLICASDDRAC
AQLREYIIVGAEAFLMRLYNKTFGKDEKAGEVWIKDRKAVKSKGNAKPDTGTQAKKAKLK
DSSKENKHKKQQDRTLPQMIGKTEEENREEELKVEEYKELSSSQESSLEEAVPEDFHINL
PSDSYYGIFKTPLTIIHPLQGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASR
PGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVIPEEREGRDETNLDLVR
DATRATVSTDTRKAGGQEQKSAQQTVIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYIL
TPDICVERKSISDLIGSLNNGRLYTQCISMSRYYKRPILLIEFDPNKSFSLIPRGSLHQE
ISSNDVTSKLTLLTLHFPKLRILWCPSPHATAELFEELKQNHPQPDAETAMAVTADSEVL
PESDKYNPGPQDFLLKMPGVNTKNCRVLMNHVKSIAELVTLSKDKLSKILGNAINATQLF
DFIHLTYSEAISQGKNKR
NT seq 2577 nt   +upstreamnt  +downstreamnt
atggtatttggtaccaagtacttagtacaacagctggaatattttattgatcagctgagg
tcagatggagttgttcatcttcctcggcgtgttaccaatgaaattacaaataatattcgg
tatgaattttacacacaaggaggtgtcctctttgcaacgagtcgaatcctcgtggtagat
ttcctcactgacagaattcctgcaaacctcattactggcattttggtatacaaagcacac
agaatcattgagtcctgtcaggaagcatttatcttgcgactttatcgccagaagaacaag
caaggcttcattaaagcttttacagataatgcagttgcatttaacactggcttttgccat
gtagaaagagtgatgagaaatctttttgtcaggaaactttatctgtggccaagatttcat
atagctgtgaactcatttttagagaagcataaacctgaagtggtagaaatacacgtgtcg
atgactcctggtatgcttgctatccagacttcaatactggacattttgaatgcatgtctg
agagaactcaaacgttataatccagctcttgaagtagaagatctatctttagaaaatgct
attggtaaaccttttgacaagacaatacgtcactatttagatcctctctggcatcagctt
ggagctaagacaaaatctttagtccaggatttgaagatactgcgtactttgctacaatat
ctcactcagtatgattgtgtcactttccttaatcttttggagtcactgaaagcaagtgag
aaagcctttggtgagaattcaggttggctgtttcttgattctagtacttcaatgtttata
aatgctcgggccagagtttatcgcgttgcagatgacagaatgactaaaaaaaccaaagtt
tctgaaaaccatgatgtaaagaaggaaaatgaactgaaaagggaattggttctagaaagt
aacccaaaatgggaagctttacgggaagtattgaaagaaattgaaaatgagaataagaac
agtgaagatcttggtggtccaggacaagtacttatttgtgccagtgatgaccgagcttgt
gcgcagctcagggaatacattattgttggagcagaagcttttttaatgagactgtataac
aaaacctttggaaaggatgagaaggctggagaagtgtggattaaggatagaaaagctgtc
aagtccaaaggaaatgccaaaccagacacaggaactcaagccaaaaaagccaaactcaag
gattcttcaaaagaaaataaacacaagaagcagcaagaccggactttaccccaaatgata
gggaaaactgaggaggaaaacagagaggaggagttgaaggtggaagaatacaaagaatta
agcagtagccaagaaagcagtcttgaagaggccgttcctgaagatttccatattaactta
ccctcagattcttattacggtatcttcaaaacccctctcacgattattcatccattacag
ggttgcagtgatccctatgcactcactcgagtattacatgaagtagaaccgcgatatgtt
gtattgtatgatgcagaactaacttttgttcggcagttggaaatctacaaggcaagcagg
cctggaaagcctttgagagtttatttcctcatatatgggggctcaacagaagaacagcgc
tatctcacagctctgagaaaggaaaaagaggccttcgagaaactcattcgagagaaggcc
agcatggtgattcctgaagaaagagaaggaagagatgaaacaaacttggacttagtaaga
gatgctacacgtgccactgtttccactgacacgcgcaaagcaggtggacaagaacagaag
agtgctcagcaaactgtaatagtggatatgcgggaatttcgtagtgagcttccatcgctt
attcatcgtcgtggcattgacattgagcctgttactttggaagttggagattacatttta
actcccgatatctgtgtagagcggaaaagtatcagtgatcttattggttccctaaataac
ggaagactatacacacagtgcatttctatgtcccgttactataagcgaccaattctcctg
attgaatttgatcctaacaaatctttctccttgattccacgaggctctctacatcaggag
atttccagtaatgatgttacttctaaactaacccttcttacactccatttccctaagtta
cgtatcctgtggtgtccctctcctcatgctaccgctgaactgtttgaagaattgaaacaa
aaccatccacaacctgatgcagaaacagcaatggctgtcacagcagattctgaagttctt
cctgagtcagacaagtataaccctggtcctcaggactttctattaaaaatgccaggtgtt
aacacaaaaaactgtcgtgtcttaatgaaccacgttaaaagcattgcagagctagtaacg
ctgtcaaaggacaaactttccaaaattttgggtaatgccatcaatgccacgcaactcttt
gactttattcatctgacctacagtgaggcaatatctcaaggaaaaaacaaaagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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