KEGG   Serinus canaria (common canary): 103819520
Entry
103819520         CDS       T05755                                 
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
  KO
K23380  FRAS1-related extracelluar matrix protein 1/2
Organism
scan  Serinus canaria (common canary)
Pathway
scan04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:scan00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103819520 (FREM1)
SSDB
Motif
Pfam: Cadherin_3 Frem_N Big_9 Lectin_C Calx-beta Beta-prism_lec
Other DBs
NCBI-GeneID: 103819520
NCBI-ProteinID: XP_030093414
Position
Unknown
AA seq 2176 aa
MKPFEKGWLLLLLPVALRVVCSSFISVNLGVKVMKGQSVFLSEEDLNFSIPREKDACKVE
VINEPITQRVGELTPQVFDCHFLPNEVKYTHKGCPLLDEDVVMLKLYRFTETETFVETFT
LHVQLLEPDCNIIKMRSHALEVPEYYGLSRVIDKNVLTFDYDRKINLDCAISIISSETHL
PAHGQLISRKVQQGQSRGDQPWSLSPGTKPSLGQQCRNRSCALGLGDMSNKKMSCEEFLR
MGIQYRHLDPPSPDIDYIPVRLDLSDSRSKTLHKTEYAWLPVQIRGAVPNQIPRAAPMAK
FILEVDQFILTPITTTTIDAEDNETPKSLLIFNITKPPPRGFITHLSDHTKPIGSFTWKD
LSDTLIAYQPPNNSHTERRNYEVEFEVHDFYFERSLPVTVHLSIRTADTNAPRVSWNTGL
SLLEGQSRPITWQHFQVVDNDDIQNVRLVTADGLQHGRLSVRGGKGFMFTVSDIQAGVVR
YHHDDSDSTKDFVVFRIFDGSHSIRHKFPINILPKDDSPPFLISNVVIEIQEGQTILIQR
SMLHASDMDSSDDYILFNITKLPQAGEVLKKPGPNMIGYSVNSFLQRDLFNGMIYYRHLG
GEVFEDSLEFVLCDSHDPPNLSELQVMMVHIIPVDDQLPREAPGVTRHLVVKETEISHLT
KKHLHFIDVEEQDRELTYTITTSPFFSCTHGYSDAGKLFLVDTIPKLVKDPTALALQSFT
QHAVNYMKVAYMPPLQDIGPEPQQVQFIFSVSNQHGGTLYGICFNITILPVDNQAPEVFT
THLRVQEGGMTSITEGHILISDSDTKREHLFLLLRRQPQHGVVELDNIPMNGGDRLSCED
LRTLAVRYRHDGSETLTDDVFFAATDGIHFVEFILQVKVLPVNDELPVMQTGLVPVLHCL
EGEEVVLSSEYIYATDADSDDMELVFLLARQPHHGAVRKAGIAVDRFSQADVIAGSVTYR
HTSGEIGLTPCIEILTLIVSDGEAGPDVKDCCYDGPPSPPVSRDDPFPVYDLNITVLPVD
NQPPSIVTGASFVVEEGSSAALTTKHLSATDPDTSADDLEFVLVSPPQFGYIENVLPSPG
FEKSNMGISTGSFQLKHLKAMNINYVQARHVRMEPTEDKFVLYVTDGLHRSAETPFFVRI
SPTNDEVPEFIARNITVQEGEMKELDLSVINAVDLDVPRDPLVFGVVQRPSYGFLINGVH
SSDVQHYKELINHDPHSHGLLVHGFSMELLRNGMKLMYMHDNSENLTDSFKIQLSDGKHK
VLRTISVKVIPVNDEKPVLSKKNDIEVNIGETHIISSAVLSAEDKDTPRERIYYLFERLP
ENGQLQLKVGQGWVTLLTGMKCTQEELDMNLVRYVHTGTAGSKKKDSFTFYLWDGYNRSP
AVDFYINIKDLEKGDIAVFTKLLRVPKGDHSYITTDVLLALDGSDKPEELLYVITSPPQH
GQIEYVSYPGIPITSFSQMDVARRIVCYVHKAKAVVREDAFRFIISNGLRTKHGTFKIAL
EAADQALPTLSRNMGLRLTEGAMALLTPDVLQLSDPDTAKKNLTFLLAQLPQYGHLYYNG
SVLLQYNFTQQDVDNRDVAYKHRGGNSQTDRFTFVASDRTNQGFIVNGRVQSEPVTFTIQ
VDHLDKMAPKIIHLHCFSDVELLKNGNYGIYITARSLRASDPNTEDDKIIFKILRGPHYG
YLENITTGGFIQEGFSQKDLNSKIILYVINKSREVNSDNLEFQVTDANGNSAAPQRLELR
WSQIEMLQTEYEVCENTGVVSLKITRAGHLGESAFITVKVNEISASLGKDFTVTPSKLVQ
FDPGVSTKMWNIAITYDGLEEDDEVFEVVLNSPVNAVLGTRTKTVVKILDSKGGQCSSSH
SSGQSKHDFWGRGTLFPVSSGSSAPSRPGNVSLERIPLPPSKGMREPGRDTWQEHSLANR
SRTRLRVTGNGRIVPPSSVFRNETDVIFKYHGIVSLKIEDDTSSAETKKAQPQINVISSW
KTEIPLADKAELAAEPRSRHKDFNSFQKACTPDLKGLLHYEESTQKLFQCDGISWKLWNP
QSKEVTMKKCPSGWTYHEGSCYFLVVNHKVTWNTAAQTCREQYLGSLTSVANEQHMQWLW
DFSGKMPFWIGLNDQVNPGHWEWNGGEPVTYINWRKGSYHFPVRGRNCVFVQKRGKWQAT
DCKKVKPNSYICSRKL
NT seq 6531 nt   +upstreamnt  +downstreamnt
atgaagccttttgagaaaggctggctgcttctactgctgcctgtcgccttaagagttgtg
tgctcctcctttatcagtgtgaaccttggggtgaaagtgatgaagggacagtctgtcttc
ctgtcagaagaagacctcaacttttccatccccagagagaaagatgcctgcaaagtagaa
gtgatcaatgagccaataacacagagggttggggaacttactccacaggtttttgactgt
cacttccttcctaatgaggtcaaatacacccacaaaggatgcccgcttttagatgaagac
gtggtcatgcttaagctgtacaggtttacagaaacggaaacgtttgtagaaacattcacc
ctccatgtgcagttacttgagccagactgtaacatcataaaaatgcgctcccatgcgttg
gaggtccctgaatactacggcctgtctagggtgattgacaagaacgtcctcacctttgat
tacgacaggaagataaacctggattgcgccatttccataatctcttcggaaactcacctg
cctgcccatggccagcttatctcccggaaagtgcagcaagggcagtcccgtggagatcag
ccatggagcctctcccctggcactaagcccagcctgggacaacagtgcagaaacaggagc
tgtgcactgggactaggagacatgagcaacaaaaagatgagttgtgaagaatttctgagg
atgggaattcagtacagacaccttgaccccccctcacctgacattgattatattcctgtg
aggctggatctctcagacagcagaagcaaaactctgcacaagacggagtatgcatggctc
cctgttcagattagaggcgctgttcccaaccaaatacccagagctgccccaatggcaaag
ttcatcctggaagtagatcaattcattttaacccctattacaaccacaaccattgatgca
gaagacaatgaaactccaaagtccctgcttatattcaacattaccaagccacctccacga
ggctttatcactcacctctctgaccacacgaaacctattggctccttcacatggaaggat
ctcagtgacacactcattgcttatcagcctccaaataacagccacacagagaggaggaat
tatgaggtggaatttgaggtgcatgacttctactttgaaaggagtttaccagtcactgtg
catctttctatcagaacagcagatacaaatgcccctcgggtttcgtggaatacaggcctc
agcctcctagaggggcaatcccgacccatcacctggcagcacttccaagttgtagacaat
gatgacatccaaaatgttcgcttggtcacagctgatggcttacagcatgggcggctgtca
gtcagaggagggaaaggattcatgttcactgtctctgacattcaggctggagttgtccgc
taccatcatgatgacagcgattctactaaggactttgtcgtatttagaatttttgatggc
tcccacagtattcgccacaagtttccaataaatatcctccctaaagatgatagccctcca
tttctgatcagcaatgtggtcattgaaattcaagagggacagacaatcctgattcagcgc
tccatgcttcatgcttcggacatggattccagtgatgactacatactgttcaatattacc
aagctaccacaagctggagaagtcttgaagaaacctggaccaaacatgatagggtattct
gtcaacagttttcttcagagggatctatttaatggaatgatttattatcgtcatttggga
ggagaagtatttgaagattcccttgaatttgtgctatgtgatagccatgaccctccaaat
ctctcagagctacaggtgatgatggttcacattatccctgtggatgaccagctgcccaga
gaagctccgggagtgacccgccacctggttgttaaggagactgagatttctcacctaact
aagaaacatctccacttcatagatgtggaagagcaagacagggagctcacatacaccata
accacttccccatttttctcttgcacccatggctactcagatgctgggaagctgtttttg
gtggacaccatccccaaactggtcaaggatcctactgctcttgcattgcagtcatttact
cagcatgctgtgaactatatgaaagttgcttacatgccaccactgcaggacattggaccc
gaacctcagcaagtccagtttattttttctgtcagcaatcagcatggaggcactttgtat
gggatctgcttcaatattacaattcttcctgtggacaatcaagccccagaggtttttaca
actcatttgagagtgcaagaaggtggcatgacctctattacagagggacacattctcatc
tctgattcagacacgaaacgagagcatctcttcctgctcctgcggaggcagccgcagcat
ggggtagtggagctggataacattcccatgaatggaggagacaggctttcctgtgaggac
ctgcgtaccctggcagtcagatatcgtcacgacggctctgagactctcactgatgatgtt
ttctttgcagccacagatggcatccattttgtagagttcatcctgcaggtcaaggtgctg
cctgtgaatgatgagctacctgttatgcaaacaggccttgttcccgtgctccactgcctg
gagggtgaagaagtagtcctctcctcggagtacatttacgccacagatgcggacagcgat
gacatggaactggtgttcctgctggcccgccagccccaccatggggcagtgaggaaagct
ggcattgccgtggatcgcttctcccaggctgatgtcattgctggctcagtcacatacagg
cacactagtggtgagattggcctgactccttgcattgagatcctaaccttgattgtctct
gacggcgaggctggcccagatgtgaaggactgctgttatgatgggcctccttctccccca
gtttcacgtgatgatccattccctgtctacgaccttaacatcactgtgcttccagtggac
aaccagcctccatcaattgttacaggtgcaagctttgtggtggaagagggctcttcagca
gccctcactaccaaacatttgtctgccactgaccctgacacctctgcagatgacttagag
tttgtgctggtttctcctccccagtttggttacattgaaaacgtactgccttctcctggg
tttgagaagagcaacatgggaataagcacaggttcatttcagctgaagcacctgaaagcc
atgaatataaactatgttcaagccaggcacgtgcgaatggagccaacagaggacaaattt
gtactttatgtcactgatgggctgcatcgctcagcagagactccattttttgtgagaatc
agcccaaccaatgatgaagttccagaattcatagccaggaatattaccgttcaagaaggg
gagatgaaagagctggatctgtctgttatcaatgcagttgatctggatgtgcctagagac
cctctggtatttggggtggtgcagaggccctcctacgggttccttattaatggtgttcac
agcagcgatgttcaacactataaagagttaattaaccatgatccccacagccatgggttg
cttgttcatggcttttccatggagctactgaggaatggaatgaagctgatgtacatgcat
gacaactctgaaaatctcactgacagctttaaaatccagctatcagatggaaaacataaa
gtcctcagaacaatttcagtaaaggtcattccagttaatgatgagaagccagtgctgagc
aagaagaatgatatagaggtgaacataggtgaaactcatataatttctagcgctgttctg
tcagcagaagataaagatacccccagggagagaatttactacttatttgaaagacttcca
gaaaatggtcagcttcagctcaaggtaggacaagggtgggttactctcctaactggaatg
aagtgcactcaggaagagctggatatgaaccttgtgagatatgtccacacaggaactgcg
gggtccaagaaaaaagacagcttcacgttttacctctgggatggatacaacagatcccca
gctgtggacttctacataaatatcaaggacttggaaaagggagacattgctgtttttaca
aaactcctcagagtgccaaaaggagatcacagctacattacaaccgatgtcctccttgca
ctggatggttctgacaagccagaggagctcctttatgtgataacctccccaccccagcat
ggacaaatagagtatgtcagctatcctggcatccccattacgagcttcagtcaaatggat
gtagcgcgacggattgtctgctatgttcacaaagccaaggcagttgttcgtgaagatgca
ttcagattcatcatcagcaatggactgaggactaagcatgggacattcaagattgccttg
gaggcagctgaccaggctttgcccacactatctaggaacatggggttaagattaactgaa
ggagctatggcacttcttactcctgatgtactgcagctttcagacccagatactgcgaaa
aaaaaccttaccttcctcttggctcagctcccccagtacggtcatctctattataatggg
tctgtgctgctgcagtacaatttcacacagcaagatgtggacaacagggatgttgcatac
aagcaccgaggtgggaattcccagacggacagatttacatttgttgcctcagataggact
aaccaaggcttcatcgtgaatggaagggtgcagagtgagccagtgacattcaccattcag
gtggatcatttggacaaaatggcaccaaaaattattcatctccattgtttttctgatgtg
gaactgctgaagaatggcaattatgggatctatattactgccagatccctgagggcatct
gaccccaatacagaagatgacaaaataatttttaagattttacgaggtcctcattatggc
tacctggaaaatataacaacaggtggattcattcaggaaggatttagccaaaaggattta
aacagcaaaatcatactttatgtcatcaacaaatcacgagaagtgaattcagacaacttg
gagtttcaagtgacagatgccaatggaaactctgcagcaccccaaaggctggagctacga
tggtctcagattgaaatgctacagactgaatatgaagtgtgtgaaaacacaggagtggtg
tctctgaaaatcaccagggcaggacacctgggggagtctgccttcataacggtgaaggtt
aatgaaatatctgctagtctgggaaaggacttcacggtgactccctccaagcttgttcag
tttgatccaggagtgtcaaccaagatgtggaatatagcaattacctatgacggattagag
gaagatgatgaagtctttgaagtagttctgaactcccctgtgaatgctgttcttggcaca
cggacaaaaactgtagtgaaaattttggactcaaaaggaggtcaatgcagctcttcccat
tcttctggccaaagcaagcatgacttctgggggagaggcacgctgtttccagtttcctca
ggctcctcagcaccttccaggcctggcaatgtttccttggaaaggatcccactgcctcct
tccaaagggatgagagagcctggaagggatacgtggcaggagcacagcttggcgaatcgg
tcaaggaccaggctgagagtaactggaaatggcagaatagttcctccttcatctgtattt
agaaatgaaacagatgtgattttcaaatatcacgggattgtatcactcaaaatagaggat
gacacctcctcagctgaaaccaagaaggcacaaccacagataaatgtaatctcctcttgg
aagacagaaattccactggctgataaggcagaacttgcagctgaaccaagatcaagacat
aaggactttaactcttttcaaaaggcttgtacaccagatttaaagggtctcttgcattat
gaagaaagcacacagaagttatttcagtgtgatgggatatcatggaaattgtggaatccc
caaagcaaggaggtaactatgaagaaatgtccctctggatggacttatcatgagggcagc
tgctacttcctggtagtgaatcacaaggtcacctggaacactgctgcccagacttgcaga
gaacagtacctggggagtctaacaagtgtagctaatgaacaacacatgcagtggctgtgg
gacttcagtgggaagatgcccttttggataggtttgaatgaccaagtcaatcctgggcac
tgggagtggaatggaggagagcctgtaacctacataaactggagaaaaggctcctaccac
tttccagtgagaggaagaaattgtgtatttgtgcagaagcgaggaaaatggcaagcaact
gactgcaagaaggttaaaccaaacagctatatatgttcaagaaagttgtaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system