KEGG   Parasphaerochaeta coccoides: Spico_0635
Entry
Spico_0635        CDS       T01469                                 
Name
(GenBank) hypothetical protein
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
scc  Parasphaerochaeta coccoides
Pathway
scc03030  DNA replication
scc03430  Mismatch repair
scc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:scc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Spico_0635
   03430 Mismatch repair
    Spico_0635
   03440 Homologous recombination
    Spico_0635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scc03032]
    Spico_0635
   03400 DNA repair and recombination proteins [BR:scc03400]
    Spico_0635
Enzymes [BR:scc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Spico_0635
DNA replication proteins [BR:scc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Spico_0635
DNA repair and recombination proteins [BR:scc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Spico_0635
SSDB
Motif
Pfam: DNA_pol3_delta2 DUF6650 AAA_16
Other DBs
NCBI-ProteinID: AEC01863
UniProt: F4GKV0
Position
complement(735591..736778)
AA seq 395 aa
MFEDFMRMQPRIASLLESELRQGILPRAILFSGPEFSGRMSMSLQLARSLSLNNNADGTD
RTGGALVPENNVIVISPRNHKPRICAALQAVSTHKLEAARGQVIESVSLMLAQFHGALAD
AATAGMKKLFEEAAELHDRLDEFSSLDMNGKMFKTACDALASLLKPFFALSSSSRTLTIA
QCREIQGWCRLTALDRRPRIIIIEALEQATEGARNSLLKLLEEPPENSRFILVTSHPERM
MATILSRVRQYRFASLSPKVAKEIIISRYGCEVDKNQELKDFILTAGGEDDAKKISLVQE
AAHAFAIMMSETETEDSVNLSSIITTVEDSDVIPYFFERMAEELRTLHRQDSLPAPFLHS
CLAAVSQGYQQYIVYNLPLRSLLESLCFDRRRTHE
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgtttgaagacttcatgcgaatgcaaccacggatcgcctctttgctggaaagtgaactt
cggcaggggattctaccccgtgcgatacttttttcaggtccggaattttccggccgcatg
agtatgtcattgcagcttgcccgttctctttccttgaataataacgctgatgggactgac
aggactgggggggctcttgttcctgaaaataatgtcattgtcatttctccccgcaatcac
aagccacgcatatgcgccgctttgcaagctgtcagcacccacaagcttgaagcggcaaga
ggacaggtcattgagtctgtctccctcatgcttgcgcaattccatggtgccttggcggat
gcggcgacagcaggcatgaagaaactgtttgaagaagccgcggagcttcatgaccggctt
gatgaattttcttccctcgacatgaatgggaagatgttcaagacagcgtgtgatgccttg
gcatccctgctcaaaccatttttcgctttatcatcttcttcccgcacactgactattgcc
caatgtcgggaaatccaggggtggtgcagattgacggctttggatcggcgtccccgtatt
atcatcattgaagccctggaacaagcgacggaaggagctcggaacagcctgttgaaactt
ttagaggaacctcctgaaaattcaaggttcatccttgtcacatctcatcctgaaaggatg
atggcaaccatcctttcccgtgtcaggcagtatcgttttgcttcactctcaccaaaggtt
gccaaggaaatcatcatatcacgctatggatgcgaggttgacaaaaatcaggagctgaaa
gatttcatcctgacagcgggtggagaggatgatgcaaaaaaaatcagtctggtacaggaa
gctgcccatgcttttgccataatgatgtcggaaacagagacggaagattccgtgaatctt
tccagtatcattaccacggtagaagattcggatgtgattccttattttttcgagcgcatg
gcagaagaattacggactttgcacagacaagattcgttaccagcccctttccttcactca
tgtcttgccgccgtttcacaaggataccaacagtacattgtatacaatctgccattgagg
agcctcctggagtccttgtgctttgacaggagacggactcatgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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