KEGG   Gracilinema caldarium: Spica_0294
Entry
Spica_0294        CDS       T01573                                 
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
scd  Gracilinema caldarium
Pathway
scd00061  Fatty acid biosynthesis
scd01100  Metabolic pathways
scd01212  Fatty acid metabolism
scd02024  Quorum sensing
Module
scd_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:scd00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Spica_0294
   00071 Fatty acid degradation
    Spica_0294
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Spica_0294
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:scd01004]
    Spica_0294
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scd04147]
    Spica_0294
Enzymes [BR:scd01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Spica_0294
Lipid biosynthesis proteins [BR:scd01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   Spica_0294
Exosome [BR:scd04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Spica_0294
  Exosomal proteins of breast cancer cells
   Spica_0294
SSDB
Motif
Pfam: AMP-binding
Other DBs
NCBI-ProteinID: AEJ18460
UniProt: F8EZU7
Position
328072..329985
AA seq 637 aa
MELEQTLPLLIKARAESMPQINIQYAKDESGQFIPKTYETFFKEVQIIAAGLLELGEQRG
SHIGLISDNRQEWLVTDIAVLSIGAADVPRGCDSTDKEIAYILGFSECTLSFAENPKQVE
KILSQKAQMPLLKTLVVYDKIDEALKNKASSCGVQLLHFFELHELGKKRLGKNPDEILRE
IDKGQRDDLATIIFTSGTTGEPKGVMLSHGNFLHQLPSLPLIADLKPGDVWLSVLPVWHS
FERIMQYVAPCYYNGIAYSKPVGSIMLADFKAVRPQWMASVPRIWESVRDGIYRNIRQHG
GIKKILFTFFVSVGTAHAYMRNMTLGLLPNFHRRMRALDTVLGCIPWMLLTPLKALGNVL
VFNKLKALLGGRFKAGISGGGALPSQVDKFFSAVGITLLEGYGLTETAPVIACRRMNNAR
PGCVGQIILNTEVKIVDEKGNSLPPGHQGLIMVRGGQVMKGYYKKPDLTAKVLAPDGWFN
TGDLGMLTYDNEIKITGRAKDTIVLRGGENVEPAPIEAKINESEWISQCMVVGQDQKYLA
ALIVPKQDALMAFAQENNIPIVDYETLLQQPEINELIANDVADLVGPHTGFKPFERVFKF
KLLSKPFEVGRELSHKQEIMRHRVIELYKKEISELFE
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggagcttgaacaaaccttaccgctcttgattaaagcaagagcagagtcaatgcctcag
attaacatccaatatgcaaaggatgaatcagggcaatttataccaaaaacctatgaaacc
ttttttaaggaagttcagattattgctgctggcctcttagaacttggagaacaacggggt
tctcatattgggcttatttccgataaccgtcaggaatggttggtgaccgatatcgctgtt
ctttctattggtgccgctgatgttccccgggggtgtgattctacagataaagagatcgct
tatattcttggcttttctgaatgtactctttcattcgctgaaaatcccaaacaggtagaa
aagatcctttcccagaaggcccagatgcctcttttaaaaacgctggttgtatatgacaag
attgatgaggctcttaaaaataaagcttcttcctgtggagttcaactgcttcattttttt
gaacttcatgaacttggtaaaaagcggctgggaaaaaatcctgatgaaatcttgcgtgaa
atagataaggggcagcgggatgatctggctaccatcatttttacctccggcacaacaggc
gaacccaagggtgttatgctgagtcatggaaactttctacatcaattaccgagcttaccg
ctcatcgctgacctgaagcctggcgatgtatggctttccgttctgcccgtttggcatagc
tttgaacggatcatgcagtatgttgcaccctgttattataacggtattgcctattcaaaa
cctgttggttctatcatgctggcagattttaaggcggtacgcccccaatggatggctagt
gtgccacgaatctgggaatcggtccgggatgggatttaccgtaatatccgtcaacatggg
gggatcaagaaaatcctttttaccttcttcgtttctgtcggtaccgcccatgcgtatatg
cgaaacatgacactgggtttattacccaattttcatagacggatgagagcccttgatacg
gttttaggatgtataccctggatgcttttaacgcctttaaaggctttaggcaatgtactg
gtatttaacaagctcaaagctctcttaggtggccgctttaaggctggcatttctggcggc
ggggctctgccgtcacaggtagacaagttctttagtgctgtgggcattactcttttggaa
ggttatggtcttaccgaaacagctccggttattgcctgtcgtagaatgaataatgcaagg
cccggttgtgtcggtcagattattctcaacacagaagtaaaaatagtagatgaaaagggt
aatagccttcctccgggacatcaggggcttattatggtccggggcgggcaggttatgaag
gggtactataaaaagccagacttgacggcgaaggtgcttgctcctgacggctggttcaac
actggggatctgggcatgcttacctatgataatgaaataaaaataacgggacgtgccaag
gataccatcgtattacggggtggtgaaaatgtagaacccgcaccaattgaagcgaaaata
aatgaaagtgagtggatatcccagtgtatggtagttggtcaggatcaaaaatatcttgca
gcgctgatcgtgccgaaacaggatgccctcatggcttttgcccaggaaaacaatattccg
atagtggactatgaaaccctgcttcaacagccggaaattaatgagcttattgccaatgat
gtggcggatcttgtgggtccccacaccggatttaaaccctttgaacgtgtgtttaagttt
aaattgctttctaaaccgttcgaagtaggccgagaattatcccataagcaagaaattatg
aggcatcgggtgatagaactctataaaaaggagatttctgagctctttgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system