KEGG T01573: Spica

Gracilinema caldarium: Spica_1688

Entry

Spica_1688        CDS       T01573

Name

(GenBank) Ribosomal RNA small subunit methyltransferase H

K03438

16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]

Organism

scd Gracilinema caldarium

Brite

KEGG Orthology (KO) [BR:scd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:scd03009]
    Spica_1688
Enzymes [BR:scd01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.199  16S rRNA (cytosine1402-N4)-methyltransferase
     Spica_1688
Ribosome biogenesis [BR:scd03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Spica_1688

SSDB

Motif

Pfam:

Methyltransf_5 Methyltransf_25

Other DBs

NCBI-ProteinID:

AEJ19831

UniProt:

F8F1Y4

Position

complement(1891995..1892954)

AA seq 319 aa
MSETAHYVHTPVLLEETLHYLAPRSENALMIDATLGEGGHSYAFLSRFPSLYIIGVDADP
GIQEVARKRLAEFGERIHFYSGWSHSFFAEYPSEIKRPDSILIDLGISLFHYEKSGRGFS
FRKSEALDMRLDPSFGPSAADLVMQLSERELADLIYQNGEERYSRRIAHAIVEARAKSRI
ETADMLASIIEGAVPVSYRYGAIHPATRTFQALRIAVNGELSRLESLLDAALHVLENGGR
LGVITFHSLEDRIVKNFFREKNKDCTCPPEAPICTCKGQRTVTLITKKPVAPSLEEIKAN
PPSRSAKLRVVEKVLEENL

NT seq 960 nt +upstreamnt +downstreamnt
atgtcagaaacagcacactatgttcatactccggttcttcttgaagaaacacttcattat
ctagcgccccgaagtgaaaatgctcttatgattgatgctactcttggtgaaggcggtcac
agctacgcctttttaagtcgtttccccagcctttatatcatcggtgtggatgcggatcct
ggtattcaggaagttgcgcggaagagacttgctgaatttggtgaacgaattcatttttat
tcaggatggtcccatagtttctttgctgaatatccctctgaaattaaacgtcccgatagt
attctaattgatctgggtatcagtctttttcactatgaaaaaagtgggcgtggtttcagc
ttccgaaaaagtgaagctttggatatgcgccttgatccatcctttggacccagtgcagca
gacctcgtaatgcagttatctgaacgggaactcgctgaccttatatatcagaatggggag
gaacgctattcgcgcaggattgcccatgccattgtagaggcacgggcaaaaagccgaatt
gagacggctgatatgcttgcttcaattatagaaggcgctgtgcccgtttcctatcgatat
ggggcaatacaccccgctacgagaacattccaagcactgagaattgcagtaaatggcgaa
ttaagccgcttagagtccttgcttgacgcagccctgcatgttctggaaaatggtggacgt
cttggtgttataacctttcattcattggaagaccgaattgtaaaaaatttctttagagag
aaaaacaaggactgcacctgtccgccagaagcgccgatatgtacatgtaagggacagaga
actgttactctcattaccaagaagccggttgctccgagcttagaggaaattaaagctaat
ccccccagccgaagtgctaaattgcgggtggtggaaaaggtactggaggaaaacctgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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